Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
FOXG1P55316 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
FOXG1P55316 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
FOXG1P55316 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
FOXG1P55316 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
FOXG1P55316 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
FOXG1P55316 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.22□□□□□ -0.29
FOXG1P55316 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
FOXG1P55316 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
FOXG1P55316 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
FOXG1P55316 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
FOXG1P55316 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.21□□□□□ -0.29
FOXG1P55316 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.21□□□□□ -0.29
FOXG1P55316 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.21□□□□□ -0.29
FOXG1P55316 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
FOXG1P55316 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.21□□□□□ -0.29
FOXG1P55316 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
FOXG1P55316 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.21□□□□□ -0.29
FOXG1P55316 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
FOXG1P55316 FKBP4P6-201ENST00000457486 1332 ntBASIC13.21□□□□□ -0.29
FOXG1P55316 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.21□□□□□ -0.29
FOXG1P55316 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
FOXG1P55316 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
FOXG1P55316 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
FOXG1P55316 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
FOXG1P55316 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
FOXG1P55316 AC018529.2-202ENST00000611482 3087 ntBASIC13.21□□□□□ -0.29
FOXG1P55316 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
FOXG1P55316 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.21□□□□□ -0.29
FOXG1P55316 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
FOXG1P55316 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
FOXG1P55316 RN7SKP230-201ENST00000365642 335 ntBASIC13.21□□□□□ -0.29
FOXG1P55316 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.21□□□□□ -0.29
FOXG1P55316 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
FOXG1P55316 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
FOXG1P55316 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
FOXG1P55316 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.21□□□□□ -0.29
FOXG1P55316 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
FOXG1P55316 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC13.21□□□□□ -0.29
FOXG1P55316 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.21□□□□□ -0.29
FOXG1P55316 AL583810.1-201ENST00000553344 1045 ntBASIC13.21□□□□□ -0.29
FOXG1P55316 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.21□□□□□ -0.29
FOXG1P55316 AC011840.2-201ENST00000563063 1520 ntBASIC13.21□□□□□ -0.29
FOXG1P55316 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
FOXG1P55316 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
FOXG1P55316 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
FOXG1P55316 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
FOXG1P55316 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
FOXG1P55316 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
FOXG1P55316 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.21□□□□□ -0.3
FOXG1P55316 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
FOXG1P55316 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
FOXG1P55316 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FOXG1P55316 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
FOXG1P55316 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.2□□□□□ -0.3
FOXG1P55316 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FOXG1P55316 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
FOXG1P55316 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FOXG1P55316 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.2□□□□□ -0.3
FOXG1P55316 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FOXG1P55316 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.2□□□□□ -0.3
FOXG1P55316 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.2□□□□□ -0.3
FOXG1P55316 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
FOXG1P55316 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.2□□□□□ -0.3
FOXG1P55316 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.2□□□□□ -0.3
FOXG1P55316 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
FOXG1P55316 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
FOXG1P55316 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FOXG1P55316 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
FOXG1P55316 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
FOXG1P55316 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FOXG1P55316 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FOXG1P55316 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FOXG1P55316 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
FOXG1P55316 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
FOXG1P55316 CD8B2-202ENST00000417670 633 ntBASIC13.2□□□□□ -0.3
FOXG1P55316 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.2□□□□□ -0.3
FOXG1P55316 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
FOXG1P55316 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.2□□□□□ -0.3
FOXG1P55316 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.2□□□□□ -0.3
FOXG1P55316 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
FOXG1P55316 C2orf69P2-201ENST00000562032 1123 ntBASIC13.2□□□□□ -0.3
FOXG1P55316 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.2□□□□□ -0.3
FOXG1P55316 AP006547.1-201ENST00000563435 692 ntBASIC13.2□□□□□ -0.3
FOXG1P55316 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.2□□□□□ -0.3
FOXG1P55316 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.2□□□□□ -0.3
FOXG1P55316 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
FOXG1P55316 AC073413.1-201ENST00000603927 732 ntBASIC13.2□□□□□ -0.3
FOXG1P55316 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.2□□□□□ -0.3
FOXG1P55316 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FOXG1P55316 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
FOXG1P55316 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
FOXG1P55316 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
FOXG1P55316 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
FOXG1P55316 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
FOXG1P55316 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FOXG1P55316 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FOXG1P55316 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FOXG1P55316 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FOXG1P55316 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms