Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.93□□□□□ -0.18
CDH11P55287 AL035252.4-201ENST00000624174 288 ntBASIC13.93□□□□□ -0.18
CDH11P55287 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
CDH11P55287 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH11P55287 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH11P55287 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.93□□□□□ -0.18
CDH11P55287 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.93□□□□□ -0.18
CDH11P55287 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.93□□□□□ -0.18
CDH11P55287 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH11P55287 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH11P55287 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.93□□□□□ -0.18
CDH11P55287 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH11P55287 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDH11P55287 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CDH11P55287 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CDH11P55287 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDH11P55287 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.93□□□□□ -0.18
CDH11P55287 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.93□□□□□ -0.18
CDH11P55287 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH11P55287 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDH11P55287 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.92□□□□□ -0.18
CDH11P55287 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CDH11P55287 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDH11P55287 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDH11P55287 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDH11P55287 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDH11P55287 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDH11P55287 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.92□□□□□ -0.18
CDH11P55287 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
CDH11P55287 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.92□□□□□ -0.18
CDH11P55287 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDH11P55287 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.92□□□□□ -0.18
CDH11P55287 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
CDH11P55287 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDH11P55287 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CDH11P55287 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDH11P55287 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDH11P55287 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDH11P55287 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDH11P55287 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDH11P55287 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDH11P55287 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.92□□□□□ -0.18
CDH11P55287 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDH11P55287 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDH11P55287 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.92□□□□□ -0.18
CDH11P55287 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.92□□□□□ -0.18
CDH11P55287 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CDH11P55287 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.92□□□□□ -0.18
CDH11P55287 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.92□□□□□ -0.18
CDH11P55287 SPTLC1P1-201ENST00000447199 261 ntBASIC13.92□□□□□ -0.18
CDH11P55287 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDH11P55287 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.92□□□□□ -0.18
CDH11P55287 AL512361.1-201ENST00000554200 418 ntBASIC13.92□□□□□ -0.18
CDH11P55287 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.92□□□□□ -0.18
CDH11P55287 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
CDH11P55287 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CDH11P55287 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDH11P55287 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.92□□□□□ -0.18
CDH11P55287 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDH11P55287 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.92□□□□□ -0.18
CDH11P55287 AL358472.5-202ENST00000641448 1267 ntBASIC13.92□□□□□ -0.18
CDH11P55287 AC018529.2-202ENST00000611482 3087 ntBASIC13.92□□□□□ -0.18
CDH11P55287 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CDH11P55287 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDH11P55287 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDH11P55287 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDH11P55287 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.92□□□□□ -0.18
CDH11P55287 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDH11P55287 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
CDH11P55287 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDH11P55287 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.92□□□□□ -0.18
CDH11P55287 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDH11P55287 AC041040.2-201ENST00000622926 2899 ntBASIC13.92□□□□□ -0.18
CDH11P55287 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CDH11P55287 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CDH11P55287 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.92□□□□□ -0.18
CDH11P55287 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDH11P55287 AC113367.3-201ENST00000508316 1912 ntBASIC13.92□□□□□ -0.18
CDH11P55287 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CDH11P55287 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.92□□□□□ -0.18
CDH11P55287 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDH11P55287 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDH11P55287 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDH11P55287 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDH11P55287 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDH11P55287 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDH11P55287 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDH11P55287 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.91□□□□□ -0.18
CDH11P55287 AC006504.5-208ENST00000588784 2401 ntBASIC13.91□□□□□ -0.18
CDH11P55287 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.91□□□□□ -0.18
CDH11P55287 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDH11P55287 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDH11P55287 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.91□□□□□ -0.18
CDH11P55287 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CDH11P55287 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.91□□□□□ -0.18
CDH11P55287 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
CDH11P55287 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDH11P55287 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.91□□□□□ -0.18
CDH11P55287 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
CDH11P55287 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms