Protein–RNA interactions for Protein: P55210

CASP7, Caspase-7, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP7P55210 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CASP7P55210 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CASP7P55210 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CASP7P55210 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CASP7P55210 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
CASP7P55210 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CASP7P55210 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC18.41■□□□□ 0.54
CASP7P55210 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CASP7P55210 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CASP7P55210 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CASP7P55210 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CASP7P55210 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CASP7P55210 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC18.4■□□□□ 0.54
CASP7P55210 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CASP7P55210 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CASP7P55210 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CASP7P55210 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CASP7P55210 R3HDM2P2-201ENST00000401880 2116 ntBASIC18.4■□□□□ 0.54
CASP7P55210 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CASP7P55210 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CASP7P55210 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CASP7P55210 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC18.4■□□□□ 0.54
CASP7P55210 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CASP7P55210 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC18.4■□□□□ 0.54
CASP7P55210 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC18.4■□□□□ 0.54
CASP7P55210 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC18.4■□□□□ 0.54
CASP7P55210 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CASP7P55210 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC18.4■□□□□ 0.54
CASP7P55210 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC18.4■□□□□ 0.54
CASP7P55210 AC024681.1-201ENST00000521917 487 ntBASIC18.4■□□□□ 0.54
CASP7P55210 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CASP7P55210 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC18.4■□□□□ 0.54
CASP7P55210 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC18.4■□□□□ 0.54
CASP7P55210 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CASP7P55210 AC009884.2-201ENST00000603110 324 ntBASIC18.4■□□□□ 0.54
CASP7P55210 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CASP7P55210 AP001505.2-201ENST00000616815 443 ntBASIC18.4■□□□□ 0.54
CASP7P55210 AC100757.4-201ENST00000626934 759 ntBASIC18.4■□□□□ 0.54
CASP7P55210 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC18.4■□□□□ 0.54
CASP7P55210 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CASP7P55210 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CASP7P55210 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC18.4■□□□□ 0.54
CASP7P55210 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CASP7P55210 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CASP7P55210 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CASP7P55210 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC18.4■□□□□ 0.54
CASP7P55210 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC18.4■□□□□ 0.54
CASP7P55210 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CASP7P55210 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CASP7P55210 KHSRPP1-201ENST00000427983 1768 ntBASIC18.4■□□□□ 0.54
CASP7P55210 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CASP7P55210 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CASP7P55210 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
CASP7P55210 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC18.39■□□□□ 0.54
CASP7P55210 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CASP7P55210 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.39■□□□□ 0.54
CASP7P55210 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CASP7P55210 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CASP7P55210 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
CASP7P55210 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CASP7P55210 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CASP7P55210 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CASP7P55210 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CASP7P55210 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC18.39■□□□□ 0.53
CASP7P55210 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC18.39■□□□□ 0.53
CASP7P55210 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CASP7P55210 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CASP7P55210 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CASP7P55210 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC18.39■□□□□ 0.53
CASP7P55210 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CASP7P55210 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CASP7P55210 KRT18P36-201ENST00000411618 1276 ntBASIC18.39■□□□□ 0.53
CASP7P55210 HNRNPA1P27-201ENST00000412087 955 ntBASIC18.39■□□□□ 0.53
CASP7P55210 AL008707.1-201ENST00000422498 534 ntBASIC18.39■□□□□ 0.53
CASP7P55210 AC078875.1-201ENST00000431907 724 ntBASIC18.39■□□□□ 0.53
CASP7P55210 AL596276.2-201ENST00000447525 331 ntBASIC18.39■□□□□ 0.53
CASP7P55210 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CASP7P55210 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC18.39■□□□□ 0.53
CASP7P55210 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC18.39■□□□□ 0.53
CASP7P55210 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC18.39■□□□□ 0.53
CASP7P55210 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC18.39■□□□□ 0.53
CASP7P55210 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC18.39■□□□□ 0.53
CASP7P55210 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC18.39■□□□□ 0.53
CASP7P55210 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC18.39■□□□□ 0.53
CASP7P55210 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC18.39■□□□□ 0.53
CASP7P55210 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CASP7P55210 FAS-202ENST00000352159 1722 ntTSL 5 BASIC18.39■□□□□ 0.53
CASP7P55210 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CASP7P55210 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CASP7P55210 GPI-205ENST00000586425 1799 ntTSL 5 BASIC18.39■□□□□ 0.53
CASP7P55210 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CASP7P55210 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CASP7P55210 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
CASP7P55210 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CASP7P55210 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CASP7P55210 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CASP7P55210 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CASP7P55210 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CASP7P55210 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CASP7P55210 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 321.6 ms