Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PMS1P54277 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PMS1P54277 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PMS1P54277 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.61■□□□□ 0.25
PMS1P54277 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.61■□□□□ 0.25
PMS1P54277 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PMS1P54277 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PMS1P54277 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
PMS1P54277 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.6■□□□□ 0.25
PMS1P54277 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PMS1P54277 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.6■□□□□ 0.25
PMS1P54277 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PMS1P54277 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
PMS1P54277 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PMS1P54277 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC16.6■□□□□ 0.25
PMS1P54277 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.6■□□□□ 0.25
PMS1P54277 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PMS1P54277 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PMS1P54277 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PMS1P54277 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.6■□□□□ 0.25
PMS1P54277 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC16.6■□□□□ 0.25
PMS1P54277 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PMS1P54277 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PMS1P54277 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PMS1P54277 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC16.6■□□□□ 0.25
PMS1P54277 AC055811.4-201ENST00000624039 1754 ntBASIC16.6■□□□□ 0.25
PMS1P54277 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.6■□□□□ 0.25
PMS1P54277 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.6■□□□□ 0.25
PMS1P54277 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.6■□□□□ 0.25
PMS1P54277 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
PMS1P54277 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PMS1P54277 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PMS1P54277 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PMS1P54277 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.6■□□□□ 0.25
PMS1P54277 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.6■□□□□ 0.25
PMS1P54277 BCRP1-201ENST00000444246 691 ntBASIC16.6■□□□□ 0.25
PMS1P54277 MYCLP2-201ENST00000449268 967 ntBASIC16.6■□□□□ 0.25
PMS1P54277 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
PMS1P54277 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PMS1P54277 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
PMS1P54277 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
PMS1P54277 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
PMS1P54277 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.6■□□□□ 0.25
PMS1P54277 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PMS1P54277 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.6■□□□□ 0.25
PMS1P54277 CLUHP6-201ENST00000580789 941 ntBASIC16.6■□□□□ 0.25
PMS1P54277 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.6■□□□□ 0.25
PMS1P54277 LINC02560-201ENST00000596379 459 ntBASIC16.6■□□□□ 0.25
PMS1P54277 TMEM261P1-201ENST00000604899 340 ntBASIC16.6■□□□□ 0.25
PMS1P54277 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PMS1P54277 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PMS1P54277 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PMS1P54277 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PMS1P54277 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16.6■□□□□ 0.25
PMS1P54277 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.6■□□□□ 0.25
PMS1P54277 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PMS1P54277 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.6■□□□□ 0.25
PMS1P54277 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PMS1P54277 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
PMS1P54277 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
PMS1P54277 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PMS1P54277 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PMS1P54277 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PMS1P54277 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PMS1P54277 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PMS1P54277 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PMS1P54277 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC16.6■□□□□ 0.25
PMS1P54277 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.6■□□□□ 0.25
PMS1P54277 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PMS1P54277 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PMS1P54277 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PMS1P54277 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PMS1P54277 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PMS1P54277 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PMS1P54277 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PMS1P54277 AL928921.2-201ENST00000641325 2442 ntBASIC16.59■□□□□ 0.25
PMS1P54277 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PMS1P54277 TKT-201ENST00000296289 1931 ntTSL 5 BASIC16.59■□□□□ 0.25
PMS1P54277 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PMS1P54277 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PMS1P54277 OS9-204ENST00000389146 2091 ntTSL 2 BASIC16.59■□□□□ 0.25
PMS1P54277 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PMS1P54277 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PMS1P54277 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.59■□□□□ 0.25
PMS1P54277 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PMS1P54277 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PMS1P54277 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.59■□□□□ 0.25
PMS1P54277 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.59■□□□□ 0.25
PMS1P54277 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.59■□□□□ 0.25
PMS1P54277 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PMS1P54277 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.59■□□□□ 0.25
PMS1P54277 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PMS1P54277 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
PMS1P54277 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PMS1P54277 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PMS1P54277 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PMS1P54277 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PMS1P54277 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
PMS1P54277 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.59■□□□□ 0.25
PMS1P54277 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms