Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5CP51148 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5CP51148 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
RAB5CP51148 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.2□□□□□ -0.46
RAB5CP51148 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
RAB5CP51148 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5CP51148 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
RAB5CP51148 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5CP51148 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5CP51148 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC12.2□□□□□ -0.46
RAB5CP51148 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC12.2□□□□□ -0.46
RAB5CP51148 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5CP51148 BET1L-206ENST00000486280 665 ntTSL 3 BASIC12.2□□□□□ -0.46
RAB5CP51148 HNRNPUP1-201ENST00000554987 333 ntBASIC12.2□□□□□ -0.46
RAB5CP51148 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC12.2□□□□□ -0.46
RAB5CP51148 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC12.2□□□□□ -0.46
RAB5CP51148 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC12.2□□□□□ -0.46
RAB5CP51148 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5CP51148 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC12.2□□□□□ -0.46
RAB5CP51148 MTDHP4-201ENST00000600287 670 ntBASIC12.2□□□□□ -0.46
RAB5CP51148 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC12.2□□□□□ -0.46
RAB5CP51148 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
RAB5CP51148 AC005363.2-201ENST00000618631 242 ntBASIC12.2□□□□□ -0.46
RAB5CP51148 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
RAB5CP51148 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5CP51148 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.2□□□□□ -0.46
RAB5CP51148 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5CP51148 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5CP51148 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
RAB5CP51148 DNM1P41-201ENST00000623634 3350 ntBASIC12.2□□□□□ -0.46
RAB5CP51148 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5CP51148 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5CP51148 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
RAB5CP51148 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5CP51148 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5CP51148 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5CP51148 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5CP51148 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5CP51148 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5CP51148 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5CP51148 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5CP51148 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.2□□□□□ -0.46
RAB5CP51148 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC12.2□□□□□ -0.46
RAB5CP51148 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.2□□□□□ -0.46
RAB5CP51148 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5CP51148 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5CP51148 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5CP51148 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC12.2□□□□□ -0.46
RAB5CP51148 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
RAB5CP51148 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
RAB5CP51148 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5CP51148 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5CP51148 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5CP51148 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB5CP51148 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5CP51148 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
RAB5CP51148 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
RAB5CP51148 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5CP51148 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5CP51148 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5CP51148 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5CP51148 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.19□□□□□ -0.46
RAB5CP51148 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5CP51148 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
RAB5CP51148 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5CP51148 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.19□□□□□ -0.46
RAB5CP51148 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5CP51148 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5CP51148 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5CP51148 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC12.19□□□□□ -0.46
RAB5CP51148 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5CP51148 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5CP51148 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5CP51148 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5CP51148 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5CP51148 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5CP51148 MED22-202ENST00000371999 987 ntTSL 3 BASIC12.19□□□□□ -0.46
RAB5CP51148 SYS1-203ENST00000414310 795 ntTSL 3 BASIC12.19□□□□□ -0.46
RAB5CP51148 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC12.19□□□□□ -0.46
RAB5CP51148 AC136604.1-201ENST00000418535 575 ntBASIC12.19□□□□□ -0.46
RAB5CP51148 AC132008.2-207ENST00000454517 770 ntBASIC12.19□□□□□ -0.46
RAB5CP51148 RIN3-211ENST00000557762 517 ntTSL 3 BASIC12.19□□□□□ -0.46
RAB5CP51148 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC12.19□□□□□ -0.46
RAB5CP51148 AC061975.2-201ENST00000581722 295 ntBASIC12.19□□□□□ -0.46
RAB5CP51148 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
RAB5CP51148 AC008667.4-201ENST00000607370 168 ntBASIC12.19□□□□□ -0.46
RAB5CP51148 ACTL9-202ENST00000612068 1252 ntBASIC12.19□□□□□ -0.46
RAB5CP51148 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC12.19□□□□□ -0.46
RAB5CP51148 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC12.19□□□□□ -0.46
RAB5CP51148 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC12.19□□□□□ -0.46
RAB5CP51148 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC12.19□□□□□ -0.46
RAB5CP51148 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC12.19□□□□□ -0.46
RAB5CP51148 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5CP51148 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5CP51148 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5CP51148 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
RAB5CP51148 AC068760.1-201ENST00000493579 1953 ntBASIC12.19□□□□□ -0.46
RAB5CP51148 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5CP51148 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RAB5CP51148 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms