Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
LHX2P50458 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.44□□□□□ -0.26
LHX2P50458 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LHX2P50458 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.44□□□□□ -0.26
LHX2P50458 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LHX2P50458 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LHX2P50458 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LHX2P50458 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LHX2P50458 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LHX2P50458 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LHX2P50458 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LHX2P50458 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.44□□□□□ -0.26
LHX2P50458 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LHX2P50458 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
LHX2P50458 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
LHX2P50458 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
LHX2P50458 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LHX2P50458 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LHX2P50458 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LHX2P50458 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LHX2P50458 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.43□□□□□ -0.26
LHX2P50458 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.43□□□□□ -0.26
LHX2P50458 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LHX2P50458 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LHX2P50458 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LHX2P50458 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
LHX2P50458 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LHX2P50458 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LHX2P50458 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
LHX2P50458 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LHX2P50458 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LHX2P50458 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LHX2P50458 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.43□□□□□ -0.26
LHX2P50458 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.43□□□□□ -0.26
LHX2P50458 HSPB1P2-201ENST00000448722 546 ntBASIC13.43□□□□□ -0.26
LHX2P50458 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LHX2P50458 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LHX2P50458 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.43□□□□□ -0.26
LHX2P50458 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.43□□□□□ -0.26
LHX2P50458 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
LHX2P50458 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.43□□□□□ -0.26
LHX2P50458 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.43□□□□□ -0.26
LHX2P50458 AL358472.3-201ENST00000608147 415 ntBASIC13.43□□□□□ -0.26
LHX2P50458 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.43□□□□□ -0.26
LHX2P50458 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LHX2P50458 AC005695.3-201ENST00000614522 232 ntBASIC13.43□□□□□ -0.26
LHX2P50458 AL096828.3-201ENST00000615354 462 ntBASIC13.43□□□□□ -0.26
LHX2P50458 AP001002.3-201ENST00000623482 206 ntBASIC13.43□□□□□ -0.26
LHX2P50458 AC002472.3-201ENST00000640124 621 ntBASIC13.43□□□□□ -0.26
LHX2P50458 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LHX2P50458 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.43□□□□□ -0.26
LHX2P50458 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LHX2P50458 TSPY26P-202ENST00000565928 3884 ntBASIC13.43□□□□□ -0.26
LHX2P50458 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.43□□□□□ -0.26
LHX2P50458 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LHX2P50458 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LHX2P50458 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.43□□□□□ -0.26
LHX2P50458 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.43□□□□□ -0.26
LHX2P50458 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LHX2P50458 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LHX2P50458 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LHX2P50458 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LHX2P50458 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
LHX2P50458 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LHX2P50458 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LHX2P50458 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.43□□□□□ -0.26
LHX2P50458 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
LHX2P50458 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
LHX2P50458 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
LHX2P50458 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LHX2P50458 SALL4P5-201ENST00000419001 1760 ntBASIC13.43□□□□□ -0.26
LHX2P50458 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
LHX2P50458 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LHX2P50458 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LHX2P50458 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LHX2P50458 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LHX2P50458 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
LHX2P50458 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LHX2P50458 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.42□□□□□ -0.26
LHX2P50458 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.42□□□□□ -0.26
LHX2P50458 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.42□□□□□ -0.26
LHX2P50458 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.42□□□□□ -0.26
LHX2P50458 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.42□□□□□ -0.26
LHX2P50458 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LHX2P50458 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LHX2P50458 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LHX2P50458 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LHX2P50458 AC104640.1-201ENST00000562617 2109 ntBASIC13.42□□□□□ -0.26
LHX2P50458 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
LHX2P50458 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LHX2P50458 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LHX2P50458 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.42□□□□□ -0.26
LHX2P50458 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.42□□□□□ -0.26
LHX2P50458 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.42□□□□□ -0.26
LHX2P50458 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
LHX2P50458 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.42□□□□□ -0.26
LHX2P50458 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.42□□□□□ -0.26
LHX2P50458 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LHX2P50458 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LHX2P50458 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms