Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1A1P48729 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.49□□□□□ -0.25
CSNK1A1P48729 DGCR5-201ENST00000399539 862 ntBASIC13.49□□□□□ -0.25
CSNK1A1P48729 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.49□□□□□ -0.25
CSNK1A1P48729 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1A1P48729 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.49□□□□□ -0.25
CSNK1A1P48729 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.49□□□□□ -0.25
CSNK1A1P48729 AC114812.1-204ENST00000449669 728 ntBASIC13.49□□□□□ -0.25
CSNK1A1P48729 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1A1P48729 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.49□□□□□ -0.25
CSNK1A1P48729 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.49□□□□□ -0.25
CSNK1A1P48729 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CSNK1A1P48729 AC138761.1-201ENST00000584393 385 ntBASIC13.49□□□□□ -0.25
CSNK1A1P48729 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.49□□□□□ -0.25
CSNK1A1P48729 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1A1P48729 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.49□□□□□ -0.25
CSNK1A1P48729 AL033527.5-201ENST00000641382 801 ntBASIC13.49□□□□□ -0.25
CSNK1A1P48729 PRSS30P-206ENST00000641773 873 ntBASIC13.49□□□□□ -0.25
CSNK1A1P48729 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1A1P48729 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.49□□□□□ -0.25
CSNK1A1P48729 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1A1P48729 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CSNK1A1P48729 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CSNK1A1P48729 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.49□□□□□ -0.25
CSNK1A1P48729 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1A1P48729 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.49□□□□□ -0.25
CSNK1A1P48729 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1A1P48729 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1A1P48729 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1A1P48729 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1A1P48729 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1A1P48729 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1A1P48729 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CSNK1A1P48729 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CSNK1A1P48729 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1A1P48729 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.49□□□□□ -0.25
CSNK1A1P48729 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1A1P48729 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.48□□□□□ -0.25
CSNK1A1P48729 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1A1P48729 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1A1P48729 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1A1P48729 KRT8P14-201ENST00000414254 1442 ntBASIC13.48□□□□□ -0.25
CSNK1A1P48729 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1A1P48729 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1A1P48729 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1A1P48729 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CSNK1A1P48729 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1A1P48729 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1A1P48729 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1A1P48729 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.48□□□□□ -0.25
CSNK1A1P48729 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CSNK1A1P48729 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1A1P48729 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1A1P48729 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.48□□□□□ -0.25
CSNK1A1P48729 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1A1P48729 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.48□□□□□ -0.25
CSNK1A1P48729 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.48□□□□□ -0.25
CSNK1A1P48729 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.48□□□□□ -0.25
CSNK1A1P48729 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1A1P48729 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1A1P48729 AP006294.1-201ENST00000415407 339 ntBASIC13.48□□□□□ -0.25
CSNK1A1P48729 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.48□□□□□ -0.25
CSNK1A1P48729 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1A1P48729 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1A1P48729 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CSNK1A1P48729 KRT18P25-201ENST00000508931 1278 ntBASIC13.48□□□□□ -0.25
CSNK1A1P48729 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
CSNK1A1P48729 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.48□□□□□ -0.25
CSNK1A1P48729 AP001063.1-201ENST00000568332 529 ntBASIC13.48□□□□□ -0.25
CSNK1A1P48729 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.48□□□□□ -0.25
CSNK1A1P48729 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1A1P48729 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.48□□□□□ -0.25
CSNK1A1P48729 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1A1P48729 AP005019.2-201ENST00000615104 511 ntBASIC13.48□□□□□ -0.25
CSNK1A1P48729 AC005252.2-201ENST00000624630 1141 ntBASIC13.48□□□□□ -0.25
CSNK1A1P48729 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.48□□□□□ -0.25
CSNK1A1P48729 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1A1P48729 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CSNK1A1P48729 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1A1P48729 AL137783.1-201ENST00000623494 1896 ntBASIC13.48□□□□□ -0.25
CSNK1A1P48729 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1A1P48729 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1A1P48729 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1A1P48729 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1A1P48729 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CSNK1A1P48729 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1A1P48729 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1A1P48729 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSNK1A1P48729 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.48□□□□□ -0.25
CSNK1A1P48729 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
CSNK1A1P48729 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.47□□□□□ -0.25
CSNK1A1P48729 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.47□□□□□ -0.25
CSNK1A1P48729 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
CSNK1A1P48729 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1A1P48729 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1A1P48729 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1A1P48729 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
CSNK1A1P48729 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1A1P48729 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1A1P48729 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms