Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 REXO1L2P-201ENST00000425429 2069 ntBASIC18.87■□□□□ 0.61
COL15A1P39059 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC18.87■□□□□ 0.61
COL15A1P39059 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COL15A1P39059 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL15A1P39059 LBH-202ENST00000401506 485 ntTSL 3 BASIC18.87■□□□□ 0.61
COL15A1P39059 TLE1P1-201ENST00000422965 589 ntBASIC18.87■□□□□ 0.61
COL15A1P39059 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC18.87■□□□□ 0.61
COL15A1P39059 AL645933.1-201ENST00000440087 609 ntBASIC18.87■□□□□ 0.61
COL15A1P39059 CICP12-201ENST00000455801 843 ntBASIC18.87■□□□□ 0.61
COL15A1P39059 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL15A1P39059 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC18.87■□□□□ 0.61
COL15A1P39059 RN7SL67P-201ENST00000492147 296 ntBASIC18.87■□□□□ 0.61
COL15A1P39059 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC18.87■□□□□ 0.61
COL15A1P39059 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC18.87■□□□□ 0.61
COL15A1P39059 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC18.87■□□□□ 0.61
COL15A1P39059 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC18.87■□□□□ 0.61
COL15A1P39059 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC18.87■□□□□ 0.61
COL15A1P39059 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC18.87■□□□□ 0.61
COL15A1P39059 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC18.87■□□□□ 0.61
COL15A1P39059 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL15A1P39059 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL15A1P39059 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL15A1P39059 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL15A1P39059 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
COL15A1P39059 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC18.87■□□□□ 0.61
COL15A1P39059 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.87■□□□□ 0.61
COL15A1P39059 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL15A1P39059 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL15A1P39059 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL15A1P39059 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL15A1P39059 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COL15A1P39059 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL15A1P39059 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL15A1P39059 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
COL15A1P39059 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
COL15A1P39059 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL15A1P39059 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC18.86■□□□□ 0.61
COL15A1P39059 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC18.86■□□□□ 0.61
COL15A1P39059 POU5F1P2-201ENST00000521750 823 ntBASIC18.86■□□□□ 0.61
COL15A1P39059 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC18.86■□□□□ 0.61
COL15A1P39059 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
COL15A1P39059 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COL15A1P39059 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC18.86■□□□□ 0.61
COL15A1P39059 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
COL15A1P39059 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COL15A1P39059 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC18.86■□□□□ 0.61
COL15A1P39059 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC18.86■□□□□ 0.61
COL15A1P39059 AL109837.1-201ENST00000603272 613 ntBASIC18.86■□□□□ 0.61
COL15A1P39059 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL15A1P39059 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL15A1P39059 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COL15A1P39059 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL15A1P39059 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL15A1P39059 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL15A1P39059 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC18.86■□□□□ 0.61
COL15A1P39059 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC18.86■□□□□ 0.61
COL15A1P39059 AC073347.1-201ENST00000421633 2643 ntBASIC18.86■□□□□ 0.61
COL15A1P39059 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COL15A1P39059 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL15A1P39059 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL15A1P39059 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL15A1P39059 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL15A1P39059 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL15A1P39059 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL15A1P39059 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL15A1P39059 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL15A1P39059 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.85■□□□□ 0.61
COL15A1P39059 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC18.85■□□□□ 0.61
COL15A1P39059 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL15A1P39059 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL15A1P39059 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
COL15A1P39059 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL15A1P39059 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL15A1P39059 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL15A1P39059 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL15A1P39059 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC18.85■□□□□ 0.61
COL15A1P39059 AC078991.1-201ENST00000437297 610 ntBASIC18.85■□□□□ 0.61
COL15A1P39059 CCNC-217ENST00000523985 958 ntTSL 2 BASIC18.85■□□□□ 0.61
COL15A1P39059 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
COL15A1P39059 CFL1-206ENST00000527344 962 ntTSL 2 BASIC18.85■□□□□ 0.61
COL15A1P39059 MIR3677-201ENST00000578964 60 ntBASIC18.85■□□□□ 0.61
COL15A1P39059 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC18.85■□□□□ 0.61
COL15A1P39059 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL15A1P39059 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL15A1P39059 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL15A1P39059 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC18.85■□□□□ 0.61
COL15A1P39059 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL15A1P39059 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL15A1P39059 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
COL15A1P39059 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC18.85■□□□□ 0.61
COL15A1P39059 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL15A1P39059 PGR-210ENST00000619228 3038 ntTSL 5 BASIC18.85■□□□□ 0.61
COL15A1P39059 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL15A1P39059 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL15A1P39059 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL15A1P39059 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
COL15A1P39059 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL15A1P39059 AC138035.3-201ENST00000622706 2791 ntBASIC18.85■□□□□ 0.61
COL15A1P39059 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC18.85■□□□□ 0.61
COL15A1P39059 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms