Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCN1P35523 AC112482.1-201ENST00000492080 688 ntBASIC17.27■□□□□ 0.36
CLCN1P35523 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLCN1P35523 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CLCN1P35523 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.27■□□□□ 0.36
CLCN1P35523 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.27■□□□□ 0.36
CLCN1P35523 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.27■□□□□ 0.36
CLCN1P35523 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CLCN1P35523 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.27■□□□□ 0.36
CLCN1P35523 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CLCN1P35523 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLCN1P35523 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC17.27■□□□□ 0.36
CLCN1P35523 AC023794.5-201ENST00000564380 2157 ntBASIC17.27■□□□□ 0.36
CLCN1P35523 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CLCN1P35523 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC17.27■□□□□ 0.35
CLCN1P35523 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CLCN1P35523 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLCN1P35523 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLCN1P35523 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLCN1P35523 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC17.27■□□□□ 0.35
CLCN1P35523 AC018442.1-201ENST00000421439 2061 ntBASIC17.27■□□□□ 0.35
CLCN1P35523 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC17.27■□□□□ 0.35
CLCN1P35523 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLCN1P35523 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLCN1P35523 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLCN1P35523 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLCN1P35523 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLCN1P35523 AP001972.5-201ENST00000624624 2338 ntBASIC17.26■□□□□ 0.35
CLCN1P35523 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.26■□□□□ 0.35
CLCN1P35523 AP001282.1-201ENST00000531301 1499 ntBASIC17.26■□□□□ 0.35
CLCN1P35523 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLCN1P35523 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLCN1P35523 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
CLCN1P35523 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLCN1P35523 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.26■□□□□ 0.35
CLCN1P35523 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.26■□□□□ 0.35
CLCN1P35523 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.26■□□□□ 0.35
CLCN1P35523 AL592309.1-201ENST00000443127 649 ntBASIC17.26■□□□□ 0.35
CLCN1P35523 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.26■□□□□ 0.35
CLCN1P35523 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.26■□□□□ 0.35
CLCN1P35523 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.26■□□□□ 0.35
CLCN1P35523 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.26■□□□□ 0.35
CLCN1P35523 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.26■□□□□ 0.35
CLCN1P35523 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLCN1P35523 AC024267.1-201ENST00000582320 895 ntBASIC17.26■□□□□ 0.35
CLCN1P35523 AC022145.2-201ENST00000598203 171 ntBASIC17.26■□□□□ 0.35
CLCN1P35523 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.26■□□□□ 0.35
CLCN1P35523 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.26■□□□□ 0.35
CLCN1P35523 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CLCN1P35523 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.26■□□□□ 0.35
CLCN1P35523 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CLCN1P35523 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CLCN1P35523 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CLCN1P35523 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLCN1P35523 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CLCN1P35523 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLCN1P35523 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CLCN1P35523 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC17.26■□□□□ 0.35
CLCN1P35523 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLCN1P35523 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLCN1P35523 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLCN1P35523 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.26■□□□□ 0.35
CLCN1P35523 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLCN1P35523 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CLCN1P35523 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLCN1P35523 FAM90A12P-201ENST00000519497 2375 ntBASIC17.25■□□□□ 0.35
CLCN1P35523 FAM90A24P-201ENST00000520792 2369 ntBASIC17.25■□□□□ 0.35
CLCN1P35523 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLCN1P35523 AC055811.4-201ENST00000624039 1754 ntBASIC17.25■□□□□ 0.35
CLCN1P35523 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLCN1P35523 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.25■□□□□ 0.35
CLCN1P35523 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC17.25■□□□□ 0.35
CLCN1P35523 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
CLCN1P35523 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLCN1P35523 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLCN1P35523 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLCN1P35523 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLCN1P35523 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLCN1P35523 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.25■□□□□ 0.35
CLCN1P35523 DNAJB3-201ENST00000446806 729 ntBASIC17.25■□□□□ 0.35
CLCN1P35523 IGHV3-62-201ENST00000520057 340 ntBASIC17.25■□□□□ 0.35
CLCN1P35523 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC17.25■□□□□ 0.35
CLCN1P35523 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.25■□□□□ 0.35
CLCN1P35523 SLC25A39P2-201ENST00000537614 270 ntBASIC17.25■□□□□ 0.35
CLCN1P35523 MIR4469-201ENST00000583919 79 ntBASIC17.25■□□□□ 0.35
CLCN1P35523 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.25■□□□□ 0.35
CLCN1P35523 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLCN1P35523 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.25■□□□□ 0.35
CLCN1P35523 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLCN1P35523 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.25■□□□□ 0.35
CLCN1P35523 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLCN1P35523 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC17.25■□□□□ 0.35
CLCN1P35523 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CLCN1P35523 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CLCN1P35523 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLCN1P35523 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLCN1P35523 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLCN1P35523 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.25■□□□□ 0.35
CLCN1P35523 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLCN1P35523 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms