Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC20.7■□□□□ 0.9
CPS1P31327 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC20.7■□□□□ 0.9
CPS1P31327 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC20.7■□□□□ 0.9
CPS1P31327 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPS1P31327 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CPS1P31327 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
CPS1P31327 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPS1P31327 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CPS1P31327 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CPS1P31327 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC20.7■□□□□ 0.9
CPS1P31327 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
CPS1P31327 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC20.7■□□□□ 0.9
CPS1P31327 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC20.7■□□□□ 0.9
CPS1P31327 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC20.7■□□□□ 0.9
CPS1P31327 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPS1P31327 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPS1P31327 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPS1P31327 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC20.7■□□□□ 0.9
CPS1P31327 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPS1P31327 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC20.7■□□□□ 0.9
CPS1P31327 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPS1P31327 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CPS1P31327 AC092850.2-201ENST00000623821 2697 ntBASIC20.7■□□□□ 0.9
CPS1P31327 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC20.7■□□□□ 0.9
CPS1P31327 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CPS1P31327 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC20.7■□□□□ 0.9
CPS1P31327 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.7■□□□□ 0.9
CPS1P31327 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPS1P31327 SALL4P5-201ENST00000419001 1760 ntBASIC20.7■□□□□ 0.9
CPS1P31327 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPS1P31327 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CPS1P31327 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC20.69■□□□□ 0.9
CPS1P31327 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC20.69■□□□□ 0.9
CPS1P31327 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC20.69■□□□□ 0.9
CPS1P31327 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC20.69■□□□□ 0.9
CPS1P31327 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC20.69■□□□□ 0.9
CPS1P31327 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CPS1P31327 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CPS1P31327 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CPS1P31327 DUX4L50-201ENST00000455245 715 ntBASIC20.69■□□□□ 0.9
CPS1P31327 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CPS1P31327 RN7SL582P-201ENST00000491078 279 ntBASIC20.69■□□□□ 0.9
CPS1P31327 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC20.69■□□□□ 0.9
CPS1P31327 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPS1P31327 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CPS1P31327 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC20.69■□□□□ 0.9
CPS1P31327 AC027601.3-201ENST00000622907 509 ntBASIC20.69■□□□□ 0.9
CPS1P31327 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CPS1P31327 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CPS1P31327 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC20.69■□□□□ 0.9
CPS1P31327 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CPS1P31327 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CPS1P31327 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CPS1P31327 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CPS1P31327 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPS1P31327 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPS1P31327 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPS1P31327 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CPS1P31327 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPS1P31327 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPS1P31327 CELP-201ENST00000411440 1249 ntTSL 5 BASIC20.68■□□□□ 0.9
CPS1P31327 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CPS1P31327 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC20.68■□□□□ 0.9
CPS1P31327 AC010900.1-201ENST00000449849 1296 ntBASIC20.68■□□□□ 0.9
CPS1P31327 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC20.68■□□□□ 0.9
CPS1P31327 AC068831.5-201ENST00000557387 328 ntBASIC20.68■□□□□ 0.9
CPS1P31327 AL590235.1-201ENST00000564650 861 ntBASIC20.68■□□□□ 0.9
CPS1P31327 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC20.68■□□□□ 0.9
CPS1P31327 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC20.68■□□□□ 0.9
CPS1P31327 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CPS1P31327 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC20.68■□□□□ 0.9
CPS1P31327 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC20.68■□□□□ 0.9
CPS1P31327 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CPS1P31327 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CPS1P31327 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CPS1P31327 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CPS1P31327 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CPS1P31327 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CPS1P31327 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
CPS1P31327 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.68■□□□□ 0.9
CPS1P31327 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
CPS1P31327 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC20.68■□□□□ 0.9
CPS1P31327 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CPS1P31327 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CPS1P31327 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CPS1P31327 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC20.68■□□□□ 0.9
CPS1P31327 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC20.68■□□□□ 0.9
CPS1P31327 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC20.68■□□□□ 0.9
CPS1P31327 AC106827.1-201ENST00000366454 431 ntBASIC20.68■□□□□ 0.9
CPS1P31327 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CPS1P31327 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC20.68■□□□□ 0.9
CPS1P31327 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC20.68■□□□□ 0.9
CPS1P31327 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CPS1P31327 TREHP1-201ENST00000531328 465 ntBASIC20.68■□□□□ 0.9
CPS1P31327 APOC1-209ENST00000592885 562 ntTSL 3 BASIC20.68■□□□□ 0.9
CPS1P31327 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC20.68■□□□□ 0.9
CPS1P31327 AP003680.1-201ENST00000598970 3660 ntBASIC20.68■□□□□ 0.9
CPS1P31327 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
CPS1P31327 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CPS1P31327 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms