Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HOXC12P31275 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HOXC12P31275 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HOXC12P31275 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HOXC12P31275 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.47□□□□□ -0.25
HOXC12P31275 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
HOXC12P31275 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
HOXC12P31275 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HOXC12P31275 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.47□□□□□ -0.25
HOXC12P31275 AC007551.1-201ENST00000457394 519 ntBASIC13.47□□□□□ -0.25
HOXC12P31275 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
HOXC12P31275 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.47□□□□□ -0.25
HOXC12P31275 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.47□□□□□ -0.25
HOXC12P31275 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.47□□□□□ -0.25
HOXC12P31275 AP005019.2-201ENST00000615104 511 ntBASIC13.47□□□□□ -0.25
HOXC12P31275 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.47□□□□□ -0.25
HOXC12P31275 DMBT1P1-203ENST00000636837 4628 ntBASIC13.47□□□□□ -0.25
HOXC12P31275 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HOXC12P31275 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
HOXC12P31275 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HOXC12P31275 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HOXC12P31275 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
HOXC12P31275 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
HOXC12P31275 TMBIM7P-203ENST00000641617 1718 ntBASIC13.47□□□□□ -0.25
HOXC12P31275 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
HOXC12P31275 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.47□□□□□ -0.25
HOXC12P31275 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
HOXC12P31275 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HOXC12P31275 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HOXC12P31275 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
HOXC12P31275 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.47□□□□□ -0.25
HOXC12P31275 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HOXC12P31275 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
HOXC12P31275 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HOXC12P31275 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HOXC12P31275 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.47□□□□□ -0.25
HOXC12P31275 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HOXC12P31275 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HOXC12P31275 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
HOXC12P31275 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HOXC12P31275 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HOXC12P31275 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
HOXC12P31275 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HOXC12P31275 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HOXC12P31275 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
HOXC12P31275 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HOXC12P31275 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HOXC12P31275 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HOXC12P31275 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HOXC12P31275 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.46□□□□□ -0.25
HOXC12P31275 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HOXC12P31275 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HOXC12P31275 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
HOXC12P31275 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HOXC12P31275 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HOXC12P31275 LRRC59-203ENST00000576448 1531 ntBASIC13.46□□□□□ -0.25
HOXC12P31275 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.46□□□□□ -0.25
HOXC12P31275 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
HOXC12P31275 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HOXC12P31275 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
HOXC12P31275 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.25
HOXC12P31275 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HOXC12P31275 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HOXC12P31275 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
HOXC12P31275 AL645937.2-201ENST00000396808 931 ntBASIC13.46□□□□□ -0.25
HOXC12P31275 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.46□□□□□ -0.25
HOXC12P31275 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.46□□□□□ -0.25
HOXC12P31275 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HOXC12P31275 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC13.46□□□□□ -0.25
HOXC12P31275 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.46□□□□□ -0.25
HOXC12P31275 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.46□□□□□ -0.25
HOXC12P31275 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
HOXC12P31275 SAMD11P1-201ENST00000571429 661 ntBASIC13.46□□□□□ -0.25
HOXC12P31275 RN7SL371P-201ENST00000578099 267 ntBASIC13.46□□□□□ -0.25
HOXC12P31275 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
HOXC12P31275 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.46□□□□□ -0.25
HOXC12P31275 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.46□□□□□ -0.25
HOXC12P31275 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.46□□□□□ -0.25
HOXC12P31275 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
HOXC12P31275 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
HOXC12P31275 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.46□□□□□ -0.25
HOXC12P31275 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.46□□□□□ -0.25
HOXC12P31275 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HOXC12P31275 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HOXC12P31275 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.46□□□□□ -0.25
HOXC12P31275 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.46□□□□□ -0.26
HOXC12P31275 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HOXC12P31275 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.46□□□□□ -0.26
HOXC12P31275 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HOXC12P31275 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.46□□□□□ -0.26
HOXC12P31275 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
HOXC12P31275 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
HOXC12P31275 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
HOXC12P31275 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.46□□□□□ -0.26
HOXC12P31275 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.46□□□□□ -0.26
HOXC12P31275 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.46□□□□□ -0.26
HOXC12P31275 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HOXC12P31275 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HOXC12P31275 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HOXC12P31275 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms