Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 AC134312.5-201ENST00000568031 1313 ntBASIC18.15■□□□□ 0.5
CHMLP26374 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMLP26374 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMLP26374 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC18.15■□□□□ 0.5
CHMLP26374 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
CHMLP26374 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CHMLP26374 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMLP26374 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CHMLP26374 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
CHMLP26374 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC18.14■□□□□ 0.5
CHMLP26374 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
CHMLP26374 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.5
CHMLP26374 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC18.14■□□□□ 0.5
CHMLP26374 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC18.14■□□□□ 0.49
CHMLP26374 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMLP26374 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMLP26374 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMLP26374 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMLP26374 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMLP26374 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC18.14■□□□□ 0.49
CHMLP26374 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMLP26374 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHMLP26374 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMLP26374 RN7SKP230-201ENST00000365642 335 ntBASIC18.14■□□□□ 0.49
CHMLP26374 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMLP26374 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC18.14■□□□□ 0.49
CHMLP26374 AC007969.1-201ENST00000433675 447 ntBASIC18.14■□□□□ 0.49
CHMLP26374 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMLP26374 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.14■□□□□ 0.49
CHMLP26374 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CHMLP26374 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHMLP26374 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CHMLP26374 AC092364.2-202ENST00000597012 1073 ntBASIC18.14■□□□□ 0.49
CHMLP26374 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHMLP26374 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC18.14■□□□□ 0.49
CHMLP26374 AL138709.1-201ENST00000614840 1693 ntBASIC18.14■□□□□ 0.49
CHMLP26374 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMLP26374 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMLP26374 AGGF1P1-201ENST00000509500 2073 ntBASIC18.14■□□□□ 0.49
CHMLP26374 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC18.14■□□□□ 0.49
CHMLP26374 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHMLP26374 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC18.14■□□□□ 0.49
CHMLP26374 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHMLP26374 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMLP26374 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHMLP26374 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CHMLP26374 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC18.14■□□□□ 0.49
CHMLP26374 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHMLP26374 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CHMLP26374 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC18.14■□□□□ 0.49
CHMLP26374 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMLP26374 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHMLP26374 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CHMLP26374 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHMLP26374 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHMLP26374 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHMLP26374 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC18.13■□□□□ 0.49
CHMLP26374 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHMLP26374 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHMLP26374 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CHMLP26374 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC18.13■□□□□ 0.49
CHMLP26374 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHMLP26374 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.13■□□□□ 0.49
CHMLP26374 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CHMLP26374 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC18.13■□□□□ 0.49
CHMLP26374 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CHMLP26374 SERF2-209ENST00000409646 559 ntTSL 4 BASIC18.13■□□□□ 0.49
CHMLP26374 POM121L8P-201ENST00000417732 1281 ntBASIC18.13■□□□□ 0.49
CHMLP26374 TLE1P1-201ENST00000422965 589 ntBASIC18.13■□□□□ 0.49
CHMLP26374 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18.13■□□□□ 0.49
CHMLP26374 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.13■□□□□ 0.49
CHMLP26374 POM121L9P-203ENST00000441984 1285 ntBASIC18.13■□□□□ 0.49
CHMLP26374 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.13■□□□□ 0.49
CHMLP26374 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.13■□□□□ 0.49
CHMLP26374 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CHMLP26374 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC18.13■□□□□ 0.49
CHMLP26374 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC18.13■□□□□ 0.49
CHMLP26374 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.13■□□□□ 0.49
CHMLP26374 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC18.13■□□□□ 0.49
CHMLP26374 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.13■□□□□ 0.49
CHMLP26374 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHMLP26374 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC18.13■□□□□ 0.49
CHMLP26374 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHMLP26374 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHMLP26374 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHMLP26374 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHMLP26374 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHMLP26374 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHMLP26374 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHMLP26374 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHMLP26374 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHMLP26374 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CHMLP26374 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMLP26374 UCKL1-AS1-201ENST00000623569 3602 ntBASIC18.12■□□□□ 0.49
CHMLP26374 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC18.12■□□□□ 0.49
CHMLP26374 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMLP26374 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMLP26374 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC18.12■□□□□ 0.49
CHMLP26374 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMLP26374 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms