Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATF1P18846 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
ATF1P18846 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
ATF1P18846 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATF1P18846 CICP20-201ENST00000443330 2801 ntBASIC13.33□□□□□ -0.28
ATF1P18846 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ATF1P18846 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATF1P18846 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.33□□□□□ -0.28
ATF1P18846 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATF1P18846 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.33□□□□□ -0.28
ATF1P18846 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATF1P18846 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
ATF1P18846 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
ATF1P18846 AC023090.2-201ENST00000625182 2110 ntBASIC13.33□□□□□ -0.28
ATF1P18846 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATF1P18846 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ATF1P18846 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATF1P18846 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATF1P18846 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ATF1P18846 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.32□□□□□ -0.28
ATF1P18846 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
ATF1P18846 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATF1P18846 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.32□□□□□ -0.28
ATF1P18846 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
ATF1P18846 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATF1P18846 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ATF1P18846 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATF1P18846 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATF1P18846 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATF1P18846 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATF1P18846 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATF1P18846 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.32□□□□□ -0.28
ATF1P18846 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATF1P18846 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ATF1P18846 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
ATF1P18846 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ATF1P18846 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.32□□□□□ -0.28
ATF1P18846 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.32□□□□□ -0.28
ATF1P18846 CBFB-203ENST00000561924 584 ntTSL 5 BASIC13.32□□□□□ -0.28
ATF1P18846 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.32□□□□□ -0.28
ATF1P18846 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ATF1P18846 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
ATF1P18846 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
ATF1P18846 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.32□□□□□ -0.28
ATF1P18846 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.32□□□□□ -0.28
ATF1P18846 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.32□□□□□ -0.28
ATF1P18846 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.32□□□□□ -0.28
ATF1P18846 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.32□□□□□ -0.28
ATF1P18846 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATF1P18846 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.32□□□□□ -0.28
ATF1P18846 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.32□□□□□ -0.28
ATF1P18846 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ATF1P18846 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATF1P18846 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ATF1P18846 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
ATF1P18846 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
ATF1P18846 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ATF1P18846 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATF1P18846 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATF1P18846 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATF1P18846 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
ATF1P18846 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATF1P18846 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ATF1P18846 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.32□□□□□ -0.28
ATF1P18846 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
ATF1P18846 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.32□□□□□ -0.28
ATF1P18846 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ATF1P18846 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATF1P18846 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATF1P18846 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATF1P18846 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ATF1P18846 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.31□□□□□ -0.28
ATF1P18846 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.31□□□□□ -0.28
ATF1P18846 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATF1P18846 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ATF1P18846 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.31□□□□□ -0.28
ATF1P18846 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATF1P18846 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.31□□□□□ -0.28
ATF1P18846 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATF1P18846 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATF1P18846 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
ATF1P18846 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
ATF1P18846 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
ATF1P18846 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
ATF1P18846 AC104457.1-201ENST00000401024 814 ntBASIC13.31□□□□□ -0.28
ATF1P18846 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.31□□□□□ -0.28
ATF1P18846 CNN2P11-201ENST00000429351 262 ntBASIC13.31□□□□□ -0.28
ATF1P18846 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.31□□□□□ -0.28
ATF1P18846 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATF1P18846 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.31□□□□□ -0.28
ATF1P18846 AC025181.2-201ENST00000606994 802 ntBASIC13.31□□□□□ -0.28
ATF1P18846 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.31□□□□□ -0.28
ATF1P18846 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATF1P18846 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.31□□□□□ -0.28
ATF1P18846 AL645728.2-202ENST00000641679 227 ntBASIC13.31□□□□□ -0.28
ATF1P18846 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
ATF1P18846 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATF1P18846 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ATF1P18846 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ATF1P18846 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms