Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD48P09326 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
CD48P09326 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CD48P09326 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD48P09326 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD48P09326 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CD48P09326 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD48P09326 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD48P09326 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD48P09326 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.64■□□□□ 0.1
CD48P09326 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.64■□□□□ 0.1
CD48P09326 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD48P09326 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD48P09326 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.64■□□□□ 0.09
CD48P09326 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD48P09326 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CD48P09326 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD48P09326 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.64■□□□□ 0.09
CD48P09326 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD48P09326 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.64■□□□□ 0.09
CD48P09326 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.64■□□□□ 0.09
CD48P09326 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD48P09326 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CD48P09326 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD48P09326 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD48P09326 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD48P09326 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD48P09326 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.64■□□□□ 0.09
CD48P09326 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD48P09326 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.64■□□□□ 0.09
CD48P09326 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD48P09326 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.64■□□□□ 0.09
CD48P09326 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.64■□□□□ 0.09
CD48P09326 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.64■□□□□ 0.09
CD48P09326 AC093433.1-201ENST00000458048 571 ntBASIC15.64■□□□□ 0.09
CD48P09326 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.64■□□□□ 0.09
CD48P09326 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD48P09326 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.64■□□□□ 0.09
CD48P09326 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CD48P09326 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.64■□□□□ 0.09
CD48P09326 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.64■□□□□ 0.09
CD48P09326 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.64■□□□□ 0.09
CD48P09326 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.64■□□□□ 0.09
CD48P09326 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.64■□□□□ 0.09
CD48P09326 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.64■□□□□ 0.09
CD48P09326 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD48P09326 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD48P09326 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD48P09326 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD48P09326 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CD48P09326 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.64■□□□□ 0.09
CD48P09326 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.64■□□□□ 0.09
CD48P09326 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD48P09326 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD48P09326 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.64■□□□□ 0.09
CD48P09326 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD48P09326 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.64■□□□□ 0.09
CD48P09326 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CD48P09326 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CD48P09326 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.64■□□□□ 0.09
CD48P09326 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD48P09326 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.63■□□□□ 0.09
CD48P09326 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CD48P09326 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CD48P09326 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CD48P09326 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.63■□□□□ 0.09
CD48P09326 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CD48P09326 LINC01230-201ENST00000625222 3017 ntBASIC15.63■□□□□ 0.09
CD48P09326 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CD48P09326 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CD48P09326 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CD48P09326 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CD48P09326 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.63■□□□□ 0.09
CD48P09326 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CD48P09326 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CD48P09326 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CD48P09326 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.63■□□□□ 0.09
CD48P09326 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CD48P09326 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CD48P09326 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.63■□□□□ 0.09
CD48P09326 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CD48P09326 ENPP7P5-201ENST00000541031 1031 ntBASIC15.63■□□□□ 0.09
CD48P09326 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.63■□□□□ 0.09
CD48P09326 AL033527.5-201ENST00000641382 801 ntBASIC15.63■□□□□ 0.09
CD48P09326 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CD48P09326 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CD48P09326 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.63■□□□□ 0.09
CD48P09326 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CD48P09326 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CD48P09326 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CD48P09326 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CD48P09326 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CD48P09326 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CD48P09326 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CD48P09326 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.63■□□□□ 0.09
CD48P09326 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CD48P09326 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CD48P09326 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.63■□□□□ 0.09
CD48P09326 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CD48P09326 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms