Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.26■□□□□ 0.03
VIMP08670 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
VIMP08670 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.26■□□□□ 0.03
VIMP08670 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.26■□□□□ 0.03
VIMP08670 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
VIMP08670 AF186996.4-201ENST00000467186 377 ntBASIC15.26■□□□□ 0.03
VIMP08670 AC022447.6-201ENST00000515522 438 ntBASIC15.26■□□□□ 0.03
VIMP08670 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.26■□□□□ 0.03
VIMP08670 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
VIMP08670 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.26■□□□□ 0.03
VIMP08670 AC096734.2-201ENST00000562054 433 ntBASIC15.26■□□□□ 0.03
VIMP08670 AC023141.13-201ENST00000604991 943 ntBASIC15.26■□□□□ 0.03
VIMP08670 AC007064.4-201ENST00000637740 555 ntBASIC15.26■□□□□ 0.03
VIMP08670 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
VIMP08670 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
VIMP08670 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VIMP08670 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
VIMP08670 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VIMP08670 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VIMP08670 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC15.26■□□□□ 0.03
VIMP08670 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
VIMP08670 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
VIMP08670 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VIMP08670 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VIMP08670 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.26■□□□□ 0.03
VIMP08670 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
VIMP08670 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VIMP08670 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
VIMP08670 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC15.26■□□□□ 0.03
VIMP08670 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VIMP08670 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VIMP08670 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VIMP08670 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VIMP08670 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VIMP08670 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
VIMP08670 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VIMP08670 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
VIMP08670 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
VIMP08670 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VIMP08670 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.25■□□□□ 0.03
VIMP08670 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
VIMP08670 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VIMP08670 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
VIMP08670 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
VIMP08670 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
VIMP08670 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VIMP08670 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.25■□□□□ 0.03
VIMP08670 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VIMP08670 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.25■□□□□ 0.03
VIMP08670 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.25■□□□□ 0.03
VIMP08670 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.25■□□□□ 0.03
VIMP08670 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.25■□□□□ 0.03
VIMP08670 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.25■□□□□ 0.03
VIMP08670 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.25■□□□□ 0.03
VIMP08670 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VIMP08670 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.25■□□□□ 0.03
VIMP08670 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VIMP08670 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VIMP08670 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
VIMP08670 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VIMP08670 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
VIMP08670 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
VIMP08670 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
VIMP08670 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VIMP08670 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
VIMP08670 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VIMP08670 MEX3B-202ENST00000558133 4333 ntBASIC15.25■□□□□ 0.03
VIMP08670 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC15.25■□□□□ 0.03
VIMP08670 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VIMP08670 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VIMP08670 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
VIMP08670 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VIMP08670 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.24■□□□□ 0.03
VIMP08670 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
VIMP08670 AC019294.4-201ENST00000561777 2905 ntBASIC15.24■□□□□ 0.03
VIMP08670 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
VIMP08670 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VIMP08670 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VIMP08670 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VIMP08670 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
VIMP08670 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
VIMP08670 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
VIMP08670 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.24■□□□□ 0.03
VIMP08670 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VIMP08670 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.24■□□□□ 0.03
VIMP08670 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VIMP08670 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
VIMP08670 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC15.24■□□□□ 0.03
VIMP08670 CRYGEP-201ENST00000412192 528 ntBASIC15.24■□□□□ 0.03
VIMP08670 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.24■□□□□ 0.03
VIMP08670 RHOQP3-201ENST00000437982 621 ntBASIC15.24■□□□□ 0.03
VIMP08670 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.24■□□□□ 0.03
VIMP08670 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.24■□□□□ 0.03
VIMP08670 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.24■□□□□ 0.03
VIMP08670 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.24■□□□□ 0.03
VIMP08670 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.24■□□□□ 0.03
VIMP08670 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.24■□□□□ 0.03
VIMP08670 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.24■□□□□ 0.03
VIMP08670 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.24■□□□□ 0.03
VIMP08670 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms