Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.23□□□□□ -0.13
PDGFAP04085 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.23□□□□□ -0.13
PDGFAP04085 AC007292.2-201ENST00000593524 1812 ntBASIC14.23□□□□□ -0.13
PDGFAP04085 AC023157.3-201ENST00000619086 2088 ntBASIC14.23□□□□□ -0.13
PDGFAP04085 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDGFAP04085 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
PDGFAP04085 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDGFAP04085 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.23□□□□□ -0.13
PDGFAP04085 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDGFAP04085 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PDGFAP04085 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
PDGFAP04085 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
PDGFAP04085 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PDGFAP04085 FNTAP2-201ENST00000430308 634 ntBASIC14.23□□□□□ -0.13
PDGFAP04085 AC005077.2-201ENST00000449786 690 ntBASIC14.23□□□□□ -0.13
PDGFAP04085 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.23□□□□□ -0.13
PDGFAP04085 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PDGFAP04085 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC14.23□□□□□ -0.13
PDGFAP04085 HIST2H2BC-201ENST00000498492 580 ntBASIC14.23□□□□□ -0.13
PDGFAP04085 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC14.23□□□□□ -0.13
PDGFAP04085 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PDGFAP04085 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.23□□□□□ -0.13
PDGFAP04085 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC14.23□□□□□ -0.13
PDGFAP04085 FOS-206ENST00000555347 1280 ntTSL 2 BASIC14.23□□□□□ -0.13
PDGFAP04085 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.23□□□□□ -0.13
PDGFAP04085 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.23□□□□□ -0.13
PDGFAP04085 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.23□□□□□ -0.13
PDGFAP04085 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
PDGFAP04085 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.23□□□□□ -0.13
PDGFAP04085 AL096828.3-201ENST00000615354 462 ntBASIC14.23□□□□□ -0.13
PDGFAP04085 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.23□□□□□ -0.13
PDGFAP04085 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.23□□□□□ -0.13
PDGFAP04085 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDGFAP04085 AC018735.1-201ENST00000437208 1502 ntBASIC14.23□□□□□ -0.13
PDGFAP04085 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
PDGFAP04085 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
PDGFAP04085 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDGFAP04085 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDGFAP04085 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PDGFAP04085 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDGFAP04085 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.23□□□□□ -0.13
PDGFAP04085 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.23□□□□□ -0.13
PDGFAP04085 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.23□□□□□ -0.13
PDGFAP04085 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDGFAP04085 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.23□□□□□ -0.13
PDGFAP04085 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PDGFAP04085 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PDGFAP04085 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.23□□□□□ -0.13
PDGFAP04085 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDGFAP04085 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.22□□□□□ -0.13
PDGFAP04085 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDGFAP04085 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
PDGFAP04085 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PDGFAP04085 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDGFAP04085 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.22□□□□□ -0.13
PDGFAP04085 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDGFAP04085 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PDGFAP04085 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDGFAP04085 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.13
PDGFAP04085 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.22□□□□□ -0.13
PDGFAP04085 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PDGFAP04085 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.22□□□□□ -0.13
PDGFAP04085 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.22□□□□□ -0.13
PDGFAP04085 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDGFAP04085 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PDGFAP04085 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDGFAP04085 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDGFAP04085 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDGFAP04085 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
PDGFAP04085 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
PDGFAP04085 AL133267.1-201ENST00000398220 340 ntBASIC14.22□□□□□ -0.13
PDGFAP04085 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.22□□□□□ -0.13
PDGFAP04085 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PDGFAP04085 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
PDGFAP04085 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.22□□□□□ -0.13
PDGFAP04085 RNA5SP486-201ENST00000515961 83 ntBASIC14.22□□□□□ -0.13
PDGFAP04085 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.22□□□□□ -0.13
PDGFAP04085 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.13
PDGFAP04085 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDGFAP04085 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC14.22□□□□□ -0.13
PDGFAP04085 AC132938.4-201ENST00000623835 848 ntBASIC14.22□□□□□ -0.13
PDGFAP04085 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
PDGFAP04085 AC006453.4-201ENST00000636949 1252 ntBASIC14.22□□□□□ -0.13
PDGFAP04085 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
PDGFAP04085 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDGFAP04085 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDGFAP04085 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.22□□□□□ -0.13
PDGFAP04085 AL138799.1-201ENST00000448213 1675 ntBASIC14.22□□□□□ -0.13
PDGFAP04085 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.22□□□□□ -0.13
PDGFAP04085 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.22□□□□□ -0.13
PDGFAP04085 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDGFAP04085 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDGFAP04085 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDGFAP04085 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PDGFAP04085 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.22□□□□□ -0.13
PDGFAP04085 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.22□□□□□ -0.13
PDGFAP04085 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
PDGFAP04085 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDGFAP04085 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PDGFAP04085 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms