Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
ALDH1A1P00352 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC16.92■□□□□ 0.3
ALDH1A1P00352 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC16.92■□□□□ 0.3
ALDH1A1P00352 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC16.92■□□□□ 0.3
ALDH1A1P00352 AC120057.1-201ENST00000483947 663 ntBASIC16.92■□□□□ 0.3
ALDH1A1P00352 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ALDH1A1P00352 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC16.92■□□□□ 0.3
ALDH1A1P00352 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC16.92■□□□□ 0.3
ALDH1A1P00352 PEBP1P2-201ENST00000603980 558 ntBASIC16.92■□□□□ 0.3
ALDH1A1P00352 AL022334.2-201ENST00000610000 484 ntBASIC16.92■□□□□ 0.3
ALDH1A1P00352 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.92■□□□□ 0.3
ALDH1A1P00352 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.92■□□□□ 0.3
ALDH1A1P00352 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALDH1A1P00352 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
ALDH1A1P00352 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ALDH1A1P00352 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALDH1A1P00352 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALDH1A1P00352 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.92■□□□□ 0.3
ALDH1A1P00352 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALDH1A1P00352 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALDH1A1P00352 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALDH1A1P00352 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALDH1A1P00352 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ALDH1A1P00352 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ALDH1A1P00352 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
ALDH1A1P00352 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
ALDH1A1P00352 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALDH1A1P00352 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALDH1A1P00352 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.91■□□□□ 0.3
ALDH1A1P00352 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.91■□□□□ 0.3
ALDH1A1P00352 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALDH1A1P00352 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALDH1A1P00352 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALDH1A1P00352 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.91■□□□□ 0.3
ALDH1A1P00352 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ALDH1A1P00352 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALDH1A1P00352 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.91■□□□□ 0.3
ALDH1A1P00352 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ALDH1A1P00352 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ALDH1A1P00352 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.91■□□□□ 0.3
ALDH1A1P00352 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
ALDH1A1P00352 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ALDH1A1P00352 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALDH1A1P00352 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALDH1A1P00352 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.91■□□□□ 0.3
ALDH1A1P00352 ERP29P1-201ENST00000442902 706 ntBASIC16.91■□□□□ 0.3
ALDH1A1P00352 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ALDH1A1P00352 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC16.91■□□□□ 0.3
ALDH1A1P00352 AC093909.3-201ENST00000504783 336 ntBASIC16.91■□□□□ 0.3
ALDH1A1P00352 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC16.91■□□□□ 0.3
ALDH1A1P00352 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC16.91■□□□□ 0.3
ALDH1A1P00352 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ALDH1A1P00352 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.91■□□□□ 0.3
ALDH1A1P00352 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALDH1A1P00352 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALDH1A1P00352 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALDH1A1P00352 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALDH1A1P00352 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALDH1A1P00352 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.91■□□□□ 0.3
ALDH1A1P00352 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALDH1A1P00352 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALDH1A1P00352 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.91■□□□□ 0.3
ALDH1A1P00352 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALDH1A1P00352 AC021305.1-201ENST00000520656 1514 ntBASIC16.91■□□□□ 0.3
ALDH1A1P00352 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALDH1A1P00352 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALDH1A1P00352 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.9■□□□□ 0.3
ALDH1A1P00352 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALDH1A1P00352 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.9■□□□□ 0.3
ALDH1A1P00352 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.9■□□□□ 0.3
ALDH1A1P00352 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.9■□□□□ 0.3
ALDH1A1P00352 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALDH1A1P00352 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALDH1A1P00352 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
ALDH1A1P00352 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
ALDH1A1P00352 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ALDH1A1P00352 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALDH1A1P00352 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALDH1A1P00352 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ALDH1A1P00352 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ALDH1A1P00352 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALDH1A1P00352 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALDH1A1P00352 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALDH1A1P00352 ZNF436-AS1-201ENST00000335648 2547 ntBASIC16.9■□□□□ 0.3
ALDH1A1P00352 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC16.9■□□□□ 0.3
ALDH1A1P00352 KRT17P5-201ENST00000332088 839 ntBASIC16.9■□□□□ 0.3
ALDH1A1P00352 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALDH1A1P00352 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.9■□□□□ 0.3
ALDH1A1P00352 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC16.9■□□□□ 0.3
ALDH1A1P00352 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.9■□□□□ 0.3
ALDH1A1P00352 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ALDH1A1P00352 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALDH1A1P00352 AC244197.1-201ENST00000456494 951 ntBASIC16.9■□□□□ 0.3
ALDH1A1P00352 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC16.9■□□□□ 0.3
ALDH1A1P00352 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC16.9■□□□□ 0.3
ALDH1A1P00352 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC16.9■□□□□ 0.3
ALDH1A1P00352 MIR2392-201ENST00000584881 84 ntBASIC16.9■□□□□ 0.3
ALDH1A1P00352 NAMA-206ENST00000605377 509 ntTSL 5 BASIC16.9■□□□□ 0.3
ALDH1A1P00352 AC007250.1-201ENST00000608934 338 ntBASIC16.9■□□□□ 0.3
ALDH1A1P00352 AC244517.3-201ENST00000616254 1235 ntBASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms