Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.9■□□□□ 0.3
GGPS1O95749 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
GGPS1O95749 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GGPS1O95749 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GGPS1O95749 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GGPS1O95749 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.9■□□□□ 0.3
GGPS1O95749 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
GGPS1O95749 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
GGPS1O95749 AC009093.2-202ENST00000620513 2079 ntBASIC16.9■□□□□ 0.3
GGPS1O95749 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GGPS1O95749 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GGPS1O95749 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GGPS1O95749 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GGPS1O95749 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
GGPS1O95749 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GGPS1O95749 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
GGPS1O95749 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
GGPS1O95749 LILRP1-201ENST00000444199 1370 ntBASIC16.89■□□□□ 0.3
GGPS1O95749 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
GGPS1O95749 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
GGPS1O95749 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
GGPS1O95749 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
GGPS1O95749 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GGPS1O95749 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GGPS1O95749 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.89■□□□□ 0.29
GGPS1O95749 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.89■□□□□ 0.29
GGPS1O95749 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.89■□□□□ 0.29
GGPS1O95749 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GGPS1O95749 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GGPS1O95749 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GGPS1O95749 AC020910.5-201ENST00000623668 1865 ntBASIC16.89■□□□□ 0.29
GGPS1O95749 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
GGPS1O95749 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
GGPS1O95749 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GGPS1O95749 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
GGPS1O95749 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
GGPS1O95749 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.89■□□□□ 0.29
GGPS1O95749 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GGPS1O95749 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GGPS1O95749 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC16.89■□□□□ 0.29
GGPS1O95749 CSH2-202ENST00000345366 598 ntTSL 5 BASIC16.89■□□□□ 0.29
GGPS1O95749 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GGPS1O95749 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC16.89■□□□□ 0.29
GGPS1O95749 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.89■□□□□ 0.29
GGPS1O95749 BX284668.4-201ENST00000453917 508 ntBASIC16.89■□□□□ 0.29
GGPS1O95749 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC16.89■□□□□ 0.29
GGPS1O95749 HIST2H2BC-201ENST00000498492 580 ntBASIC16.89■□□□□ 0.29
GGPS1O95749 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC16.89■□□□□ 0.29
GGPS1O95749 AC023824.1-201ENST00000562945 2975 ntBASIC16.89■□□□□ 0.29
GGPS1O95749 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC16.89■□□□□ 0.29
GGPS1O95749 AC138696.2-201ENST00000607376 223 ntBASIC16.89■□□□□ 0.29
GGPS1O95749 AL358472.3-201ENST00000608147 415 ntBASIC16.89■□□□□ 0.29
GGPS1O95749 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GGPS1O95749 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC16.89■□□□□ 0.29
GGPS1O95749 AC002472.3-201ENST00000640124 621 ntBASIC16.89■□□□□ 0.29
GGPS1O95749 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
GGPS1O95749 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GGPS1O95749 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
GGPS1O95749 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.89■□□□□ 0.29
GGPS1O95749 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GGPS1O95749 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GGPS1O95749 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GGPS1O95749 AC011840.2-201ENST00000563063 1520 ntBASIC16.89■□□□□ 0.29
GGPS1O95749 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GGPS1O95749 NFIC-211ENST00000641145 8399 ntBASIC16.89■□□□□ 0.29
GGPS1O95749 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.89■□□□□ 0.29
GGPS1O95749 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GGPS1O95749 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GGPS1O95749 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.89■□□□□ 0.29
GGPS1O95749 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GGPS1O95749 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
GGPS1O95749 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GGPS1O95749 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
GGPS1O95749 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GGPS1O95749 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GGPS1O95749 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GGPS1O95749 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
GGPS1O95749 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GGPS1O95749 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GGPS1O95749 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GGPS1O95749 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.88■□□□□ 0.29
GGPS1O95749 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.88■□□□□ 0.29
GGPS1O95749 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GGPS1O95749 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GGPS1O95749 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.88■□□□□ 0.29
GGPS1O95749 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
GGPS1O95749 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.88■□□□□ 0.29
GGPS1O95749 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GGPS1O95749 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GGPS1O95749 SERPINA13P-202ENST00000478994 924 ntBASIC16.88■□□□□ 0.29
GGPS1O95749 AC044849.1-201ENST00000519737 1188 ntBASIC16.88■□□□□ 0.29
GGPS1O95749 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC16.88■□□□□ 0.29
GGPS1O95749 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.88■□□□□ 0.29
GGPS1O95749 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC16.88■□□□□ 0.29
GGPS1O95749 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
GGPS1O95749 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
GGPS1O95749 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.88■□□□□ 0.29
GGPS1O95749 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GGPS1O95749 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GGPS1O95749 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms