Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RAPGEF3O95398 AC095040.1-201ENST00000513286 675 ntBASIC22.01■■□□□ 1.11
RAPGEF3O95398 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC22.01■■□□□ 1.11
RAPGEF3O95398 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC22.01■■□□□ 1.11
RAPGEF3O95398 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC22.01■■□□□ 1.11
RAPGEF3O95398 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC22.01■■□□□ 1.11
RAPGEF3O95398 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RAPGEF3O95398 AC105250.1-201ENST00000509378 2057 ntBASIC22.01■■□□□ 1.11
RAPGEF3O95398 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RAPGEF3O95398 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
RAPGEF3O95398 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RAPGEF3O95398 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC22.01■■□□□ 1.11
RAPGEF3O95398 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
RAPGEF3O95398 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC22.01■■□□□ 1.11
RAPGEF3O95398 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RAPGEF3O95398 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC22.01■■□□□ 1.11
RAPGEF3O95398 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RAPGEF3O95398 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RAPGEF3O95398 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RAPGEF3O95398 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
RAPGEF3O95398 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RAPGEF3O95398 KRT8P28-201ENST00000433288 1390 ntBASIC22■■□□□ 1.11
RAPGEF3O95398 AL136172.1-201ENST00000598590 1394 ntBASIC22■■□□□ 1.11
RAPGEF3O95398 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
RAPGEF3O95398 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC22■■□□□ 1.11
RAPGEF3O95398 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC22■■□□□ 1.11
RAPGEF3O95398 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RAPGEF3O95398 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC22■■□□□ 1.11
RAPGEF3O95398 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
RAPGEF3O95398 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
RAPGEF3O95398 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC22■■□□□ 1.11
RAPGEF3O95398 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC22■■□□□ 1.11
RAPGEF3O95398 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC22■■□□□ 1.11
RAPGEF3O95398 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC22■■□□□ 1.11
RAPGEF3O95398 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC22■■□□□ 1.11
RAPGEF3O95398 HNRNPA1P42-201ENST00000458678 957 ntBASIC22■■□□□ 1.11
RAPGEF3O95398 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC22■■□□□ 1.11
RAPGEF3O95398 RN7SL665P-201ENST00000578793 300 ntBASIC22■■□□□ 1.11
RAPGEF3O95398 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC22■■□□□ 1.11
RAPGEF3O95398 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
RAPGEF3O95398 SIGLEC22P-201ENST00000599104 714 ntBASIC22■■□□□ 1.11
RAPGEF3O95398 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC22■■□□□ 1.11
RAPGEF3O95398 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC22■■□□□ 1.11
RAPGEF3O95398 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
RAPGEF3O95398 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
RAPGEF3O95398 PHB-210ENST00000511832 1509 ntTSL 2 BASIC22■■□□□ 1.11
RAPGEF3O95398 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
RAPGEF3O95398 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
RAPGEF3O95398 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RAPGEF3O95398 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
RAPGEF3O95398 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC21.99■■□□□ 1.11
RAPGEF3O95398 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC21.99■■□□□ 1.11
RAPGEF3O95398 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC21.99■■□□□ 1.11
RAPGEF3O95398 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RAPGEF3O95398 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RAPGEF3O95398 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RAPGEF3O95398 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC21.99■■□□□ 1.11
RAPGEF3O95398 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RAPGEF3O95398 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RAPGEF3O95398 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RAPGEF3O95398 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RAPGEF3O95398 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC21.99■■□□□ 1.11
RAPGEF3O95398 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
RAPGEF3O95398 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC21.99■■□□□ 1.11
RAPGEF3O95398 AL929302.1-201ENST00000426556 871 ntBASIC21.99■■□□□ 1.11
RAPGEF3O95398 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC21.99■■□□□ 1.11
RAPGEF3O95398 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RAPGEF3O95398 TRMT112P3-201ENST00000580149 358 ntBASIC21.99■■□□□ 1.11
RAPGEF3O95398 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
RAPGEF3O95398 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RAPGEF3O95398 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC21.99■■□□□ 1.11
RAPGEF3O95398 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC21.98■■□□□ 1.11
RAPGEF3O95398 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC21.98■■□□□ 1.11
RAPGEF3O95398 AP000845.1-201ENST00000581677 2131 ntBASIC21.98■■□□□ 1.11
RAPGEF3O95398 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC21.98■■□□□ 1.11
RAPGEF3O95398 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
RAPGEF3O95398 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
RAPGEF3O95398 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC21.98■■□□□ 1.11
RAPGEF3O95398 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RAPGEF3O95398 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC21.98■■□□□ 1.11
RAPGEF3O95398 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RAPGEF3O95398 JTB-202ENST00000356648 1040 ntTSL 2 BASIC21.98■■□□□ 1.11
RAPGEF3O95398 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RAPGEF3O95398 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
RAPGEF3O95398 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC21.98■■□□□ 1.11
RAPGEF3O95398 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RAPGEF3O95398 AC092580.1-201ENST00000433998 658 ntBASIC21.98■■□□□ 1.11
RAPGEF3O95398 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC21.98■■□□□ 1.11
RAPGEF3O95398 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RAPGEF3O95398 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC21.98■■□□□ 1.11
RAPGEF3O95398 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC21.98■■□□□ 1.11
RAPGEF3O95398 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
RAPGEF3O95398 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC21.98■■□□□ 1.11
RAPGEF3O95398 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC21.98■■□□□ 1.11
RAPGEF3O95398 AC008972.2-201ENST00000606587 494 ntBASIC21.98■■□□□ 1.11
RAPGEF3O95398 ST5-261ENST00000626808 1071 ntTSL 5 BASIC21.98■■□□□ 1.11
RAPGEF3O95398 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RAPGEF3O95398 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
RAPGEF3O95398 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RAPGEF3O95398 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms