Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
BEST1O76090 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
BEST1O76090 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
BEST1O76090 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
BEST1O76090 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.78■□□□□ 0.12
BEST1O76090 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
BEST1O76090 FAM86MP-201ENST00000340703 885 ntBASIC15.78■□□□□ 0.12
BEST1O76090 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.78■□□□□ 0.12
BEST1O76090 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.78■□□□□ 0.12
BEST1O76090 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.78■□□□□ 0.12
BEST1O76090 AC007969.1-201ENST00000433675 447 ntBASIC15.78■□□□□ 0.12
BEST1O76090 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
BEST1O76090 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.78■□□□□ 0.12
BEST1O76090 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.78■□□□□ 0.12
BEST1O76090 FAM86HP-204ENST00000513466 959 ntBASIC15.78■□□□□ 0.12
BEST1O76090 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
BEST1O76090 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.78■□□□□ 0.12
BEST1O76090 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.78■□□□□ 0.12
BEST1O76090 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.78■□□□□ 0.12
BEST1O76090 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
BEST1O76090 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.78■□□□□ 0.12
BEST1O76090 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.78■□□□□ 0.12
BEST1O76090 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.78■□□□□ 0.12
BEST1O76090 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.78■□□□□ 0.12
BEST1O76090 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
BEST1O76090 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.78■□□□□ 0.12
BEST1O76090 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.78■□□□□ 0.12
BEST1O76090 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.78■□□□□ 0.12
BEST1O76090 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.78■□□□□ 0.12
BEST1O76090 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
BEST1O76090 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
BEST1O76090 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
BEST1O76090 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
BEST1O76090 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.78■□□□□ 0.12
BEST1O76090 AC013726.1-201ENST00000563747 2285 ntBASIC15.78■□□□□ 0.12
BEST1O76090 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
BEST1O76090 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
BEST1O76090 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
BEST1O76090 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
BEST1O76090 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
BEST1O76090 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.77■□□□□ 0.12
BEST1O76090 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.77■□□□□ 0.12
BEST1O76090 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.77■□□□□ 0.12
BEST1O76090 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
BEST1O76090 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
BEST1O76090 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
BEST1O76090 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.77■□□□□ 0.12
BEST1O76090 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
BEST1O76090 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
BEST1O76090 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
BEST1O76090 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
BEST1O76090 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
BEST1O76090 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
BEST1O76090 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
BEST1O76090 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
BEST1O76090 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
BEST1O76090 MIR326-201ENST00000362220 95 ntBASIC15.77■□□□□ 0.12
BEST1O76090 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.77■□□□□ 0.12
BEST1O76090 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
BEST1O76090 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.77■□□□□ 0.12
BEST1O76090 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
BEST1O76090 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
BEST1O76090 HIST2H2BB-201ENST00000449108 381 ntBASIC15.77■□□□□ 0.12
BEST1O76090 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
BEST1O76090 RPSAP36-202ENST00000494591 1261 ntBASIC15.77■□□□□ 0.12
BEST1O76090 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.77■□□□□ 0.12
BEST1O76090 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
BEST1O76090 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
BEST1O76090 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
BEST1O76090 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.77■□□□□ 0.12
BEST1O76090 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.77■□□□□ 0.12
BEST1O76090 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.77■□□□□ 0.12
BEST1O76090 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.77■□□□□ 0.12
BEST1O76090 MIR4538-201ENST00000581377 78 ntBASIC15.77■□□□□ 0.12
BEST1O76090 AL358472.3-201ENST00000608147 415 ntBASIC15.77■□□□□ 0.12
BEST1O76090 ZACNP1-201ENST00000612259 710 ntBASIC15.77■□□□□ 0.12
BEST1O76090 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.77■□□□□ 0.12
BEST1O76090 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
BEST1O76090 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
BEST1O76090 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
BEST1O76090 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.77■□□□□ 0.11
BEST1O76090 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.77■□□□□ 0.11
BEST1O76090 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.77■□□□□ 0.11
BEST1O76090 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.77■□□□□ 0.11
BEST1O76090 AC018442.1-201ENST00000421439 2061 ntBASIC15.77■□□□□ 0.11
BEST1O76090 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
BEST1O76090 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.77■□□□□ 0.11
BEST1O76090 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.77■□□□□ 0.11
BEST1O76090 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
BEST1O76090 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
BEST1O76090 AC006058.4-201ENST00000624016 1670 ntBASIC15.76■□□□□ 0.11
BEST1O76090 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
BEST1O76090 TSPY26P-202ENST00000565928 3884 ntBASIC15.76■□□□□ 0.11
BEST1O76090 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.76■□□□□ 0.11
BEST1O76090 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
BEST1O76090 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
BEST1O76090 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
BEST1O76090 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
BEST1O76090 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
BEST1O76090 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms