Protein–RNA interactions for Protein: O75871

CEACAM4, Carcinoembryonic antigen-related cell adhesion molecule 4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4O75871 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM4O75871 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC13.54□□□□□ -0.24
CEACAM4O75871 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
CEACAM4O75871 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM4O75871 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM4O75871 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM4O75871 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC13.54□□□□□ -0.24
CEACAM4O75871 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM4O75871 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC13.54□□□□□ -0.24
CEACAM4O75871 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC13.54□□□□□ -0.24
CEACAM4O75871 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC13.54□□□□□ -0.24
CEACAM4O75871 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC13.54□□□□□ -0.24
CEACAM4O75871 PGAM1P5-201ENST00000548011 764 ntBASIC13.54□□□□□ -0.24
CEACAM4O75871 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.54□□□□□ -0.24
CEACAM4O75871 RBM8B-201ENST00000555532 525 ntBASIC13.54□□□□□ -0.24
CEACAM4O75871 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC13.54□□□□□ -0.24
CEACAM4O75871 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC13.54□□□□□ -0.24
CEACAM4O75871 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC13.54□□□□□ -0.24
CEACAM4O75871 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC13.54□□□□□ -0.24
CEACAM4O75871 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.54□□□□□ -0.24
CEACAM4O75871 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC13.54□□□□□ -0.24
CEACAM4O75871 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.54□□□□□ -0.24
CEACAM4O75871 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM4O75871 AC074138.1-201ENST00000611182 1303 ntBASIC13.54□□□□□ -0.24
CEACAM4O75871 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
CEACAM4O75871 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM4O75871 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM4O75871 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM4O75871 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM4O75871 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.54□□□□□ -0.24
CEACAM4O75871 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.54□□□□□ -0.24
CEACAM4O75871 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC13.54□□□□□ -0.24
CEACAM4O75871 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM4O75871 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM4O75871 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM4O75871 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM4O75871 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.54□□□□□ -0.24
CEACAM4O75871 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM4O75871 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.53□□□□□ -0.24
CEACAM4O75871 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM4O75871 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.53□□□□□ -0.24
CEACAM4O75871 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM4O75871 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM4O75871 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.53□□□□□ -0.24
CEACAM4O75871 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CEACAM4O75871 AC007292.2-201ENST00000593524 1812 ntBASIC13.53□□□□□ -0.24
CEACAM4O75871 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM4O75871 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13.53□□□□□ -0.24
CEACAM4O75871 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM4O75871 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM4O75871 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.53□□□□□ -0.24
CEACAM4O75871 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM4O75871 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CEACAM4O75871 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CEACAM4O75871 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM4O75871 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CEACAM4O75871 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM4O75871 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM4O75871 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.53□□□□□ -0.24
CEACAM4O75871 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.53□□□□□ -0.24
CEACAM4O75871 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM4O75871 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM4O75871 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM4O75871 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC13.53□□□□□ -0.24
CEACAM4O75871 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC13.53□□□□□ -0.24
CEACAM4O75871 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.53□□□□□ -0.24
CEACAM4O75871 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.53□□□□□ -0.24
CEACAM4O75871 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM4O75871 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC13.53□□□□□ -0.24
CEACAM4O75871 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC13.53□□□□□ -0.24
CEACAM4O75871 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CEACAM4O75871 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM4O75871 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CEACAM4O75871 LINC01783-202ENST00000614408 828 ntBASIC13.53□□□□□ -0.24
CEACAM4O75871 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC13.53□□□□□ -0.24
CEACAM4O75871 BX284668.2-205ENST00000619677 828 ntBASIC13.53□□□□□ -0.24
CEACAM4O75871 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM4O75871 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.53□□□□□ -0.24
CEACAM4O75871 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
CEACAM4O75871 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM4O75871 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM4O75871 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM4O75871 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM4O75871 AL118508.1-201ENST00000613502 2345 ntBASIC13.53□□□□□ -0.24
CEACAM4O75871 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM4O75871 AL391005.1-201ENST00000623953 2435 ntBASIC13.53□□□□□ -0.24
CEACAM4O75871 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM4O75871 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM4O75871 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.53□□□□□ -0.24
CEACAM4O75871 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM4O75871 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.53□□□□□ -0.24
CEACAM4O75871 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM4O75871 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.53□□□□□ -0.24
CEACAM4O75871 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM4O75871 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM4O75871 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CEACAM4O75871 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CEACAM4O75871 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM4O75871 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM4O75871 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms