Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL1O75677 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
RFPL1O75677 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL1O75677 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL1O75677 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RFPL1O75677 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.19■□□□□ 0.02
RFPL1O75677 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL1O75677 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL1O75677 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL1O75677 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL1O75677 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL1O75677 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL1O75677 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL1O75677 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RFPL1O75677 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL1O75677 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL1O75677 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.19■□□□□ 0.02
RFPL1O75677 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL1O75677 U91328.1-201ENST00000437528 223 ntBASIC15.19■□□□□ 0.02
RFPL1O75677 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.19■□□□□ 0.02
RFPL1O75677 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.19■□□□□ 0.02
RFPL1O75677 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.19■□□□□ 0.02
RFPL1O75677 GIMAP3P-201ENST00000495150 836 ntBASIC15.19■□□□□ 0.02
RFPL1O75677 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
RFPL1O75677 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.19■□□□□ 0.02
RFPL1O75677 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL1O75677 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.19■□□□□ 0.02
RFPL1O75677 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.19■□□□□ 0.02
RFPL1O75677 AC004840.1-201ENST00000636359 365 ntBASIC15.19■□□□□ 0.02
RFPL1O75677 AL109936.8-201ENST00000641772 604 ntBASIC15.19■□□□□ 0.02
RFPL1O75677 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL1O75677 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.19■□□□□ 0.02
RFPL1O75677 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL1O75677 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL1O75677 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL1O75677 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.19■□□□□ 0.02
RFPL1O75677 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.19■□□□□ 0.02
RFPL1O75677 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL1O75677 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL1O75677 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL1O75677 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL1O75677 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.19■□□□□ 0.02
RFPL1O75677 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL1O75677 AC055811.4-201ENST00000624039 1754 ntBASIC15.19■□□□□ 0.02
RFPL1O75677 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
RFPL1O75677 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RFPL1O75677 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RFPL1O75677 AL354702.1-201ENST00000442006 1960 ntBASIC15.18■□□□□ 0.02
RFPL1O75677 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFPL1O75677 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RFPL1O75677 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFPL1O75677 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.18■□□□□ 0.02
RFPL1O75677 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFPL1O75677 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFPL1O75677 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFPL1O75677 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFPL1O75677 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFPL1O75677 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RFPL1O75677 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFPL1O75677 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFPL1O75677 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFPL1O75677 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFPL1O75677 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.18■□□□□ 0.02
RFPL1O75677 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RFPL1O75677 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
RFPL1O75677 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
RFPL1O75677 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFPL1O75677 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RFPL1O75677 AC011495.1-201ENST00000498085 584 ntBASIC15.18■□□□□ 0.02
RFPL1O75677 ZNF890P-202ENST00000530367 1156 ntBASIC15.18■□□□□ 0.02
RFPL1O75677 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.18■□□□□ 0.02
RFPL1O75677 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
RFPL1O75677 AC104794.3-201ENST00000566840 1248 ntBASIC15.18■□□□□ 0.02
RFPL1O75677 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.18■□□□□ 0.02
RFPL1O75677 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RFPL1O75677 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
RFPL1O75677 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RFPL1O75677 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFPL1O75677 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFPL1O75677 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFPL1O75677 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RFPL1O75677 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFPL1O75677 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFPL1O75677 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFPL1O75677 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFPL1O75677 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFPL1O75677 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFPL1O75677 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFPL1O75677 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.17■□□□□ 0.02
RFPL1O75677 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RFPL1O75677 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.17■□□□□ 0.02
RFPL1O75677 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFPL1O75677 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RFPL1O75677 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFPL1O75677 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFPL1O75677 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFPL1O75677 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFPL1O75677 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFPL1O75677 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFPL1O75677 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms