Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.46□□□□□ -0.09
LCMT2O60294 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.46□□□□□ -0.09
LCMT2O60294 AC025279.2-201ENST00000569730 653 ntBASIC14.46□□□□□ -0.09
LCMT2O60294 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LCMT2O60294 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LCMT2O60294 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.46□□□□□ -0.09
LCMT2O60294 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LCMT2O60294 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.46□□□□□ -0.09
LCMT2O60294 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LCMT2O60294 AL603764.1-201ENST00000636452 321 ntBASIC14.46□□□□□ -0.09
LCMT2O60294 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
LCMT2O60294 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LCMT2O60294 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.46□□□□□ -0.09
LCMT2O60294 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
LCMT2O60294 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
LCMT2O60294 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
LCMT2O60294 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
LCMT2O60294 CICP14-201ENST00000629111 2732 ntBASIC14.46□□□□□ -0.09
LCMT2O60294 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LCMT2O60294 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LCMT2O60294 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.46□□□□□ -0.1
LCMT2O60294 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LCMT2O60294 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.46□□□□□ -0.1
LCMT2O60294 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
LCMT2O60294 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.46□□□□□ -0.1
LCMT2O60294 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
LCMT2O60294 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.46□□□□□ -0.1
LCMT2O60294 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
LCMT2O60294 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LCMT2O60294 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LCMT2O60294 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LCMT2O60294 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.45□□□□□ -0.1
LCMT2O60294 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LCMT2O60294 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
LCMT2O60294 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LCMT2O60294 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
LCMT2O60294 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LCMT2O60294 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.45□□□□□ -0.1
LCMT2O60294 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LCMT2O60294 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
LCMT2O60294 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
LCMT2O60294 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.45□□□□□ -0.1
LCMT2O60294 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.45□□□□□ -0.1
LCMT2O60294 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LCMT2O60294 AC112492.5-201ENST00000421897 457 ntBASIC14.45□□□□□ -0.1
LCMT2O60294 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LCMT2O60294 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.45□□□□□ -0.1
LCMT2O60294 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.45□□□□□ -0.1
LCMT2O60294 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.45□□□□□ -0.1
LCMT2O60294 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.45□□□□□ -0.1
LCMT2O60294 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.45□□□□□ -0.1
LCMT2O60294 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.45□□□□□ -0.1
LCMT2O60294 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.45□□□□□ -0.1
LCMT2O60294 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.45□□□□□ -0.1
LCMT2O60294 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.45□□□□□ -0.1
LCMT2O60294 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LCMT2O60294 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.45□□□□□ -0.1
LCMT2O60294 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LCMT2O60294 AC132938.4-201ENST00000623835 848 ntBASIC14.45□□□□□ -0.1
LCMT2O60294 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
LCMT2O60294 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.45□□□□□ -0.1
LCMT2O60294 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LCMT2O60294 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LCMT2O60294 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LCMT2O60294 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LCMT2O60294 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
LCMT2O60294 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LCMT2O60294 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LCMT2O60294 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.45□□□□□ -0.1
LCMT2O60294 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.45□□□□□ -0.1
LCMT2O60294 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LCMT2O60294 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LCMT2O60294 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LCMT2O60294 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LCMT2O60294 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LCMT2O60294 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LCMT2O60294 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LCMT2O60294 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LCMT2O60294 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LCMT2O60294 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LCMT2O60294 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LCMT2O60294 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.44□□□□□ -0.1
LCMT2O60294 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.44□□□□□ -0.1
LCMT2O60294 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LCMT2O60294 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LCMT2O60294 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.44□□□□□ -0.1
LCMT2O60294 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
LCMT2O60294 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.44□□□□□ -0.1
LCMT2O60294 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LCMT2O60294 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.44□□□□□ -0.1
LCMT2O60294 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LCMT2O60294 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LCMT2O60294 AC079776.1-201ENST00000401540 1152 ntBASIC14.44□□□□□ -0.1
LCMT2O60294 POM121L8P-201ENST00000417732 1281 ntBASIC14.44□□□□□ -0.1
LCMT2O60294 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.44□□□□□ -0.1
LCMT2O60294 AC016694.1-201ENST00000434179 700 ntBASIC14.44□□□□□ -0.1
LCMT2O60294 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LCMT2O60294 POM121L9P-203ENST00000441984 1285 ntBASIC14.44□□□□□ -0.1
LCMT2O60294 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
LCMT2O60294 AC007551.1-201ENST00000457394 519 ntBASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms