Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.36■□□□□ 0.21
EXTL3O43909 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
EXTL3O43909 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
EXTL3O43909 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
EXTL3O43909 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
EXTL3O43909 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
EXTL3O43909 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
EXTL3O43909 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
EXTL3O43909 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
EXTL3O43909 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
EXTL3O43909 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
EXTL3O43909 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.35■□□□□ 0.21
EXTL3O43909 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
EXTL3O43909 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
EXTL3O43909 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
EXTL3O43909 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.35■□□□□ 0.21
EXTL3O43909 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
EXTL3O43909 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
EXTL3O43909 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
EXTL3O43909 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
EXTL3O43909 REXO1L6P-201ENST00000603433 1515 ntBASIC16.35■□□□□ 0.21
EXTL3O43909 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.35■□□□□ 0.21
EXTL3O43909 AC063926.3-201ENST00000624734 5658 ntBASIC16.35■□□□□ 0.21
EXTL3O43909 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
EXTL3O43909 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
EXTL3O43909 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
EXTL3O43909 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.35■□□□□ 0.21
EXTL3O43909 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
EXTL3O43909 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.35■□□□□ 0.21
EXTL3O43909 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
EXTL3O43909 TLE1P1-201ENST00000422965 589 ntBASIC16.35■□□□□ 0.21
EXTL3O43909 AC007969.1-201ENST00000433675 447 ntBASIC16.35■□□□□ 0.21
EXTL3O43909 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.35■□□□□ 0.21
EXTL3O43909 CTBP2P5-201ENST00000454986 1264 ntBASIC16.35■□□□□ 0.21
EXTL3O43909 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
EXTL3O43909 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
EXTL3O43909 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.35■□□□□ 0.21
EXTL3O43909 AL138725.1-201ENST00000407347 1314 ntBASIC16.35■□□□□ 0.21
EXTL3O43909 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
EXTL3O43909 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
EXTL3O43909 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
EXTL3O43909 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
EXTL3O43909 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
EXTL3O43909 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
EXTL3O43909 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
EXTL3O43909 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
EXTL3O43909 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
EXTL3O43909 AC003102.2-201ENST00000589195 1469 ntBASIC16.35■□□□□ 0.21
EXTL3O43909 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
EXTL3O43909 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
EXTL3O43909 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.34■□□□□ 0.21
EXTL3O43909 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
EXTL3O43909 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
EXTL3O43909 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
EXTL3O43909 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
EXTL3O43909 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
EXTL3O43909 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
EXTL3O43909 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
EXTL3O43909 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
EXTL3O43909 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
EXTL3O43909 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.34■□□□□ 0.21
EXTL3O43909 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
EXTL3O43909 ANKRD19P-201ENST00000338192 862 ntBASIC16.34■□□□□ 0.21
EXTL3O43909 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
EXTL3O43909 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
EXTL3O43909 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.34■□□□□ 0.21
EXTL3O43909 KRT223P-202ENST00000449164 1292 ntBASIC16.34■□□□□ 0.21
EXTL3O43909 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.34■□□□□ 0.21
EXTL3O43909 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.34■□□□□ 0.21
EXTL3O43909 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.34■□□□□ 0.21
EXTL3O43909 AC104989.1-201ENST00000519711 778 ntBASIC16.34■□□□□ 0.21
EXTL3O43909 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
EXTL3O43909 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.34■□□□□ 0.21
EXTL3O43909 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.34■□□□□ 0.21
EXTL3O43909 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.34■□□□□ 0.21
EXTL3O43909 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.34■□□□□ 0.21
EXTL3O43909 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
EXTL3O43909 AC133552.6-201ENST00000613406 534 ntBASIC16.34■□□□□ 0.21
EXTL3O43909 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.34■□□□□ 0.21
EXTL3O43909 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
EXTL3O43909 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
EXTL3O43909 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
EXTL3O43909 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
EXTL3O43909 FLJ16779-201ENST00000612722 7638 ntBASIC16.34■□□□□ 0.21
EXTL3O43909 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
EXTL3O43909 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
EXTL3O43909 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
EXTL3O43909 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
EXTL3O43909 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
EXTL3O43909 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
EXTL3O43909 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
EXTL3O43909 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.34■□□□□ 0.21
EXTL3O43909 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.33■□□□□ 0.21
EXTL3O43909 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
EXTL3O43909 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
EXTL3O43909 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.33■□□□□ 0.21
EXTL3O43909 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
EXTL3O43909 CICP23-201ENST00000605013 2741 ntBASIC16.33■□□□□ 0.21
EXTL3O43909 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
EXTL3O43909 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms