Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 DDX39AP1-201ENST00000445147 1181 ntBASIC17.98■□□□□ 0.47
FOXN1O15353 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC17.98■□□□□ 0.47
FOXN1O15353 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC17.98■□□□□ 0.47
FOXN1O15353 AC021723.1-201ENST00000486306 515 ntBASIC17.98■□□□□ 0.47
FOXN1O15353 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
FOXN1O15353 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC17.98■□□□□ 0.47
FOXN1O15353 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC17.98■□□□□ 0.47
FOXN1O15353 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC17.98■□□□□ 0.47
FOXN1O15353 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC17.98■□□□□ 0.47
FOXN1O15353 MIR4313-201ENST00000580760 101 ntBASIC17.98■□□□□ 0.47
FOXN1O15353 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
FOXN1O15353 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.98■□□□□ 0.47
FOXN1O15353 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
FOXN1O15353 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC17.98■□□□□ 0.47
FOXN1O15353 AC242376.2-201ENST00000619355 883 ntBASIC17.98■□□□□ 0.47
FOXN1O15353 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC17.98■□□□□ 0.47
FOXN1O15353 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
FOXN1O15353 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
FOXN1O15353 AC138035.3-201ENST00000622706 2791 ntBASIC17.98■□□□□ 0.47
FOXN1O15353 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
FOXN1O15353 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXN1O15353 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXN1O15353 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
FOXN1O15353 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXN1O15353 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
FOXN1O15353 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXN1O15353 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.98■□□□□ 0.47
FOXN1O15353 AC074138.1-201ENST00000611182 1303 ntBASIC17.98■□□□□ 0.47
FOXN1O15353 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXN1O15353 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXN1O15353 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
FOXN1O15353 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.97■□□□□ 0.47
FOXN1O15353 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
FOXN1O15353 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXN1O15353 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXN1O15353 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXN1O15353 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXN1O15353 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
FOXN1O15353 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC17.97■□□□□ 0.47
FOXN1O15353 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC17.97■□□□□ 0.47
FOXN1O15353 SYT17-208ENST00000568433 812 ntTSL 3 BASIC17.97■□□□□ 0.47
FOXN1O15353 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC17.97■□□□□ 0.47
FOXN1O15353 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC17.97■□□□□ 0.47
FOXN1O15353 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
FOXN1O15353 AC051619.9-201ENST00000623237 597 ntBASIC17.97■□□□□ 0.47
FOXN1O15353 AL132780.4-201ENST00000624870 1135 ntBASIC17.97■□□□□ 0.47
FOXN1O15353 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
FOXN1O15353 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
FOXN1O15353 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXN1O15353 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.97■□□□□ 0.47
FOXN1O15353 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.97■□□□□ 0.47
FOXN1O15353 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXN1O15353 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXN1O15353 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.97■□□□□ 0.47
FOXN1O15353 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXN1O15353 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.97■□□□□ 0.47
FOXN1O15353 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXN1O15353 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.97■□□□□ 0.47
FOXN1O15353 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.97■□□□□ 0.47
FOXN1O15353 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
FOXN1O15353 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXN1O15353 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
FOXN1O15353 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
FOXN1O15353 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.96■□□□□ 0.47
FOXN1O15353 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.96■□□□□ 0.47
FOXN1O15353 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
FOXN1O15353 AC007787.1-201ENST00000588095 1583 ntBASIC17.96■□□□□ 0.47
FOXN1O15353 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXN1O15353 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.96■□□□□ 0.47
FOXN1O15353 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXN1O15353 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXN1O15353 AC006486.2-201ENST00000624246 2199 ntBASIC17.96■□□□□ 0.47
FOXN1O15353 KRT8P29-201ENST00000420409 1371 ntBASIC17.96■□□□□ 0.47
FOXN1O15353 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.96■□□□□ 0.47
FOXN1O15353 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC17.96■□□□□ 0.47
FOXN1O15353 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXN1O15353 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
FOXN1O15353 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC17.96■□□□□ 0.47
FOXN1O15353 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
FOXN1O15353 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
FOXN1O15353 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXN1O15353 ACTBP7-201ENST00000418351 1124 ntBASIC17.96■□□□□ 0.47
FOXN1O15353 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
FOXN1O15353 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC17.96■□□□□ 0.47
FOXN1O15353 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXN1O15353 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC17.96■□□□□ 0.47
FOXN1O15353 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
FOXN1O15353 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC17.96■□□□□ 0.47
FOXN1O15353 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC17.96■□□□□ 0.47
FOXN1O15353 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC17.96■□□□□ 0.47
FOXN1O15353 SAMD11P1-201ENST00000571429 661 ntBASIC17.96■□□□□ 0.47
FOXN1O15353 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.96■□□□□ 0.47
FOXN1O15353 AC103810.10-201ENST00000606504 343 ntBASIC17.96■□□□□ 0.47
FOXN1O15353 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXN1O15353 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.96■□□□□ 0.47
FOXN1O15353 REXO1L1P-202ENST00000608646 1974 ntBASIC17.96■□□□□ 0.47
FOXN1O15353 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC17.96■□□□□ 0.47
FOXN1O15353 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXN1O15353 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXN1O15353 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms