Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MID1O15344 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MID1O15344 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MID1O15344 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.1■□□□□ 0.01
MID1O15344 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MID1O15344 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.1■□□□□ 0.01
MID1O15344 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
MID1O15344 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MID1O15344 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
MID1O15344 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MID1O15344 FNTAP2-201ENST00000430308 634 ntBASIC15.1■□□□□ 0.01
MID1O15344 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC15.1■□□□□ 0.01
MID1O15344 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MID1O15344 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.1■□□□□ 0.01
MID1O15344 SCARNA20.5-201ENST00000516991 142 ntBASIC15.1■□□□□ 0.01
MID1O15344 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.1■□□□□ 0.01
MID1O15344 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.1■□□□□ 0.01
MID1O15344 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.1■□□□□ 0.01
MID1O15344 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC15.1■□□□□ 0.01
MID1O15344 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.1■□□□□ 0.01
MID1O15344 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.1■□□□□ 0.01
MID1O15344 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC15.1■□□□□ 0.01
MID1O15344 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MID1O15344 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MID1O15344 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MID1O15344 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MID1O15344 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MID1O15344 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MID1O15344 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
MID1O15344 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MID1O15344 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MID1O15344 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
MID1O15344 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MID1O15344 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MID1O15344 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MID1O15344 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
MID1O15344 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.1■□□□□ 0.01
MID1O15344 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
MID1O15344 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MID1O15344 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MID1O15344 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MID1O15344 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MID1O15344 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
MID1O15344 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MID1O15344 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.1■□□□□ 0.01
MID1O15344 LILRP1-201ENST00000444199 1370 ntBASIC15.1■□□□□ 0.01
MID1O15344 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
MID1O15344 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MID1O15344 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.09■□□□□ 0.01
MID1O15344 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
MID1O15344 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MID1O15344 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
MID1O15344 AC132872.4-202ENST00000622924 2756 ntBASIC15.09■□□□□ 0.01
MID1O15344 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
MID1O15344 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MID1O15344 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.09■□□□□ 0.01
MID1O15344 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.09■□□□□ 0.01
MID1O15344 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MID1O15344 AC009093.2-202ENST00000620513 2079 ntBASIC15.09■□□□□ 0.01
MID1O15344 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
MID1O15344 AC011840.2-201ENST00000563063 1520 ntBASIC15.09■□□□□ 0.01
MID1O15344 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.09■□□□□ 0.01
MID1O15344 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
MID1O15344 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MID1O15344 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
MID1O15344 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
MID1O15344 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.09■□□□□ 0.01
MID1O15344 RN7SKP175-201ENST00000408472 289 ntBASIC15.09■□□□□ 0.01
MID1O15344 AL354877.1-201ENST00000424412 413 ntBASIC15.09■□□□□ 0.01
MID1O15344 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC15.09■□□□□ 0.01
MID1O15344 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.09■□□□□ 0.01
MID1O15344 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC15.09■□□□□ 0.01
MID1O15344 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC15.09■□□□□ 0.01
MID1O15344 ACTG1P17-201ENST00000558391 1119 ntBASIC15.09■□□□□ 0.01
MID1O15344 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MID1O15344 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.09■□□□□ 0.01
MID1O15344 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
MID1O15344 AC020910.5-201ENST00000623668 1865 ntBASIC15.09■□□□□ 0.01
MID1O15344 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
MID1O15344 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.09■□□□□ 0.01
MID1O15344 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MID1O15344 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC15.09■□□□□ 0.01
MID1O15344 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MID1O15344 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
MID1O15344 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MID1O15344 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
MID1O15344 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
MID1O15344 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MID1O15344 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MID1O15344 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MID1O15344 TMBIM7P-203ENST00000641617 1718 ntBASIC15.09■□□□□ 0.01
MID1O15344 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
MID1O15344 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
MID1O15344 AC138028.6-201ENST00000616106 1482 ntBASIC15.08■□□□□ 0.01
MID1O15344 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
MID1O15344 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.08■□□□□ 0
MID1O15344 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MID1O15344 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MID1O15344 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.08■□□□□ 0
MID1O15344 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms