Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A1O14983 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A1O14983 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A1O14983 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A1O14983 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A1O14983 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
ATP2A1O14983 AC087481.3-201ENST00000602886 1894 ntBASIC17.21■□□□□ 0.35
ATP2A1O14983 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A1O14983 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A1O14983 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC17.21■□□□□ 0.35
ATP2A1O14983 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
ATP2A1O14983 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A1O14983 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A1O14983 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A1O14983 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A1O14983 CYP46A4P-201ENST00000414953 267 ntBASIC17.21■□□□□ 0.35
ATP2A1O14983 TLE1P1-201ENST00000422965 589 ntBASIC17.21■□□□□ 0.35
ATP2A1O14983 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A1O14983 FAM58BP-201ENST00000439056 645 ntBASIC17.21■□□□□ 0.35
ATP2A1O14983 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC17.21■□□□□ 0.35
ATP2A1O14983 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A1O14983 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
ATP2A1O14983 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC17.21■□□□□ 0.35
ATP2A1O14983 RERG-205ENST00000537647 935 ntTSL 2 BASIC17.21■□□□□ 0.35
ATP2A1O14983 CSH2-206ENST00000560142 749 ntTSL 5 BASIC17.21■□□□□ 0.35
ATP2A1O14983 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A1O14983 RN7SL163P-201ENST00000583100 276 ntBASIC17.21■□□□□ 0.35
ATP2A1O14983 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A1O14983 AC100757.4-201ENST00000626934 759 ntBASIC17.21■□□□□ 0.35
ATP2A1O14983 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.21■□□□□ 0.35
ATP2A1O14983 AC004923.1-202ENST00000642106 209 ntBASIC17.21■□□□□ 0.35
ATP2A1O14983 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
ATP2A1O14983 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A1O14983 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A1O14983 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
ATP2A1O14983 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A1O14983 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A1O14983 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ATP2A1O14983 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.21■□□□□ 0.34
ATP2A1O14983 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ATP2A1O14983 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ATP2A1O14983 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
ATP2A1O14983 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2A1O14983 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2A1O14983 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.2■□□□□ 0.34
ATP2A1O14983 AL359258.3-201ENST00000622910 2331 ntBASIC17.2■□□□□ 0.34
ATP2A1O14983 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.2■□□□□ 0.34
ATP2A1O14983 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2A1O14983 MROH4P-201ENST00000431302 1578 ntBASIC17.2■□□□□ 0.34
ATP2A1O14983 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.2■□□□□ 0.34
ATP2A1O14983 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.2■□□□□ 0.34
ATP2A1O14983 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2A1O14983 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.2■□□□□ 0.34
ATP2A1O14983 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2A1O14983 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC17.2■□□□□ 0.34
ATP2A1O14983 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2A1O14983 NPPA-201ENST00000376476 728 ntTSL 3 BASIC17.2■□□□□ 0.34
ATP2A1O14983 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2A1O14983 AK6-201ENST00000380818 1183 ntTSL 2 BASIC17.2■□□□□ 0.34
ATP2A1O14983 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
ATP2A1O14983 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC17.2■□□□□ 0.34
ATP2A1O14983 RNMTL1P1-201ENST00000454103 560 ntBASIC17.2■□□□□ 0.34
ATP2A1O14983 SDHD-202ENST00000525291 790 ntTSL 3 BASIC17.2■□□□□ 0.34
ATP2A1O14983 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.2■□□□□ 0.34
ATP2A1O14983 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2A1O14983 AC013355.1-201ENST00000562625 723 ntBASIC17.2■□□□□ 0.34
ATP2A1O14983 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC17.2■□□□□ 0.34
ATP2A1O14983 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC17.2■□□□□ 0.34
ATP2A1O14983 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
ATP2A1O14983 AC068587.8-201ENST00000641239 219 ntBASIC17.2■□□□□ 0.34
ATP2A1O14983 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
ATP2A1O14983 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2A1O14983 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2A1O14983 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.2■□□□□ 0.34
ATP2A1O14983 AC112693.3-201ENST00000624819 1983 ntBASIC17.2■□□□□ 0.34
ATP2A1O14983 AC126365.1-201ENST00000578585 1514 ntBASIC17.2■□□□□ 0.34
ATP2A1O14983 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC17.2■□□□□ 0.34
ATP2A1O14983 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2A1O14983 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.2■□□□□ 0.34
ATP2A1O14983 AP000845.1-201ENST00000581677 2131 ntBASIC17.2■□□□□ 0.34
ATP2A1O14983 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2A1O14983 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.19■□□□□ 0.34
ATP2A1O14983 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
ATP2A1O14983 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ATP2A1O14983 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP2A1O14983 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.19■□□□□ 0.34
ATP2A1O14983 AC004899.1-201ENST00000424687 1714 ntBASIC17.19■□□□□ 0.34
ATP2A1O14983 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
ATP2A1O14983 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.19■□□□□ 0.34
ATP2A1O14983 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC17.19■□□□□ 0.34
ATP2A1O14983 AC020910.5-201ENST00000623668 1865 ntBASIC17.19■□□□□ 0.34
ATP2A1O14983 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
ATP2A1O14983 MIR769-201ENST00000390225 118 ntBASIC17.19■□□□□ 0.34
ATP2A1O14983 CRCP-204ENST00000398684 492 ntTSL 2 BASIC17.19■□□□□ 0.34
ATP2A1O14983 SPTLC1P5-201ENST00000450718 252 ntBASIC17.19■□□□□ 0.34
ATP2A1O14983 OARD1-204ENST00000464633 717 ntTSL 2 BASIC17.19■□□□□ 0.34
ATP2A1O14983 AC106794.1-201ENST00000506935 792 ntBASIC17.19■□□□□ 0.34
ATP2A1O14983 MARK2P5-201ENST00000507649 634 ntBASIC17.19■□□□□ 0.34
ATP2A1O14983 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.19■□□□□ 0.34
ATP2A1O14983 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms