Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
UPK2O00526 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.15□□□□□ -0.46
UPK2O00526 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
UPK2O00526 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
UPK2O00526 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
UPK2O00526 KRT18P28-201ENST00000453838 1332 ntBASIC12.15□□□□□ -0.46
UPK2O00526 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
UPK2O00526 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC12.15□□□□□ -0.46
UPK2O00526 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
UPK2O00526 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
UPK2O00526 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
UPK2O00526 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
UPK2O00526 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.15□□□□□ -0.46
UPK2O00526 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
UPK2O00526 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.15□□□□□ -0.46
UPK2O00526 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
UPK2O00526 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
UPK2O00526 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
UPK2O00526 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.15□□□□□ -0.46
UPK2O00526 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC12.15□□□□□ -0.46
UPK2O00526 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC12.15□□□□□ -0.46
UPK2O00526 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.15□□□□□ -0.46
UPK2O00526 RN7SL399P-201ENST00000471648 279 ntBASIC12.15□□□□□ -0.46
UPK2O00526 AC004890.2-204ENST00000481968 304 ntBASIC12.15□□□□□ -0.46
UPK2O00526 RPL13AP25-201ENST00000484130 612 ntBASIC12.15□□□□□ -0.46
UPK2O00526 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC12.15□□□□□ -0.46
UPK2O00526 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
UPK2O00526 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.15□□□□□ -0.46
UPK2O00526 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
UPK2O00526 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
UPK2O00526 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC12.15□□□□□ -0.46
UPK2O00526 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC12.15□□□□□ -0.46
UPK2O00526 AC093813.1-201ENST00000605066 256 ntBASIC12.15□□□□□ -0.46
UPK2O00526 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC12.15□□□□□ -0.46
UPK2O00526 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC12.15□□□□□ -0.46
UPK2O00526 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
UPK2O00526 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
UPK2O00526 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
UPK2O00526 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
UPK2O00526 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
UPK2O00526 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
UPK2O00526 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
UPK2O00526 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
UPK2O00526 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.15□□□□□ -0.46
UPK2O00526 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
UPK2O00526 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
UPK2O00526 HSPA7-201ENST00000445535 1927 ntBASIC12.15□□□□□ -0.46
UPK2O00526 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
UPK2O00526 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.15□□□□□ -0.46
UPK2O00526 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
UPK2O00526 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC12.15□□□□□ -0.47
UPK2O00526 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.15□□□□□ -0.47
UPK2O00526 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
UPK2O00526 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC12.15□□□□□ -0.47
UPK2O00526 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
UPK2O00526 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
UPK2O00526 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UPK2O00526 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
UPK2O00526 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UPK2O00526 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
UPK2O00526 AC023090.2-201ENST00000625182 2110 ntBASIC12.14□□□□□ -0.47
UPK2O00526 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.14□□□□□ -0.47
UPK2O00526 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
UPK2O00526 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
UPK2O00526 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC12.14□□□□□ -0.47
UPK2O00526 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
UPK2O00526 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UPK2O00526 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
UPK2O00526 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UPK2O00526 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
UPK2O00526 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.14□□□□□ -0.47
UPK2O00526 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
UPK2O00526 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
UPK2O00526 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.14□□□□□ -0.47
UPK2O00526 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UPK2O00526 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
UPK2O00526 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
UPK2O00526 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UPK2O00526 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
UPK2O00526 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
UPK2O00526 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.14□□□□□ -0.47
UPK2O00526 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UPK2O00526 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
UPK2O00526 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UPK2O00526 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
UPK2O00526 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UPK2O00526 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UPK2O00526 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
UPK2O00526 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.14□□□□□ -0.47
UPK2O00526 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC12.14□□□□□ -0.47
UPK2O00526 METTL21AP1-201ENST00000438852 635 ntBASIC12.14□□□□□ -0.47
UPK2O00526 VDAC1P7-201ENST00000462417 847 ntBASIC12.14□□□□□ -0.47
UPK2O00526 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
UPK2O00526 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC12.14□□□□□ -0.47
UPK2O00526 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC12.14□□□□□ -0.47
UPK2O00526 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC12.14□□□□□ -0.47
UPK2O00526 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC12.14□□□□□ -0.47
UPK2O00526 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
UPK2O00526 AL662799.1-202ENST00000614205 422 ntBASIC12.14□□□□□ -0.47
UPK2O00526 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms