Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC11.11□□□□□ -0.63
SMKR1H3BMG3 AC098831.1-202ENST00000438821 336 ntBASIC11.11□□□□□ -0.63
SMKR1H3BMG3 AC009947.1-201ENST00000444350 727 ntBASIC11.11□□□□□ -0.63
SMKR1H3BMG3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC11.11□□□□□ -0.63
SMKR1H3BMG3 AF186996.4-201ENST00000467186 377 ntBASIC11.11□□□□□ -0.63
SMKR1H3BMG3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC11.11□□□□□ -0.63
SMKR1H3BMG3 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SMKR1H3BMG3 FAM215A-202ENST00000632077 792 ntBASIC11.11□□□□□ -0.63
SMKR1H3BMG3 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMKR1H3BMG3 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMKR1H3BMG3 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
SMKR1H3BMG3 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
SMKR1H3BMG3 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMKR1H3BMG3 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMKR1H3BMG3 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC11.11□□□□□ -0.63
SMKR1H3BMG3 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMKR1H3BMG3 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC11.11□□□□□ -0.63
SMKR1H3BMG3 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SMKR1H3BMG3 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMKR1H3BMG3 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
SMKR1H3BMG3 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMKR1H3BMG3 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
SMKR1H3BMG3 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SMKR1H3BMG3 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC11.11□□□□□ -0.63
SMKR1H3BMG3 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
SMKR1H3BMG3 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMKR1H3BMG3 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 PP14571-201ENST00000404327 934 ntTSL 2 BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 TPT1P11-201ENST00000458482 498 ntBASIC11.1□□□□□ -0.63
SMKR1H3BMG3 AC022447.6-201ENST00000515522 438 ntBASIC11.1□□□□□ -0.63
SMKR1H3BMG3 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 AC018845.2-201ENST00000568326 409 ntBASIC11.1□□□□□ -0.63
SMKR1H3BMG3 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 AC027307.2-201ENST00000591252 911 ntBASIC11.1□□□□□ -0.63
SMKR1H3BMG3 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 AC004877.2-201ENST00000623941 599 ntBASIC11.1□□□□□ -0.63
SMKR1H3BMG3 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 MFF-204ENST00000353339 2186 ntTSL 5 BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC11.1□□□□□ -0.63
SMKR1H3BMG3 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMKR1H3BMG3 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms