Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TVP23AA6NH52 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
TVP23AA6NH52 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TVP23AA6NH52 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.58□□□□□ -0.24
TVP23AA6NH52 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.58□□□□□ -0.24
TVP23AA6NH52 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.58□□□□□ -0.24
TVP23AA6NH52 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
TVP23AA6NH52 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
TVP23AA6NH52 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TVP23AA6NH52 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TVP23AA6NH52 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TVP23AA6NH52 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TVP23AA6NH52 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TVP23AA6NH52 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TVP23AA6NH52 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TVP23AA6NH52 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TVP23AA6NH52 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.57□□□□□ -0.24
TVP23AA6NH52 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TVP23AA6NH52 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TVP23AA6NH52 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TVP23AA6NH52 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TVP23AA6NH52 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TVP23AA6NH52 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TVP23AA6NH52 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TVP23AA6NH52 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TVP23AA6NH52 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TVP23AA6NH52 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
TVP23AA6NH52 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.57□□□□□ -0.24
TVP23AA6NH52 AL589987.1-201ENST00000453380 819 ntBASIC13.57□□□□□ -0.24
TVP23AA6NH52 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TVP23AA6NH52 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.57□□□□□ -0.24
TVP23AA6NH52 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.57□□□□□ -0.24
TVP23AA6NH52 AC015911.4-201ENST00000588022 1070 ntBASIC13.57□□□□□ -0.24
TVP23AA6NH52 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.57□□□□□ -0.24
TVP23AA6NH52 AL158211.3-201ENST00000607385 239 ntBASIC13.57□□□□□ -0.24
TVP23AA6NH52 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.57□□□□□ -0.24
TVP23AA6NH52 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TVP23AA6NH52 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TVP23AA6NH52 AL158212.4-201ENST00000624062 1286 ntBASIC13.57□□□□□ -0.24
TVP23AA6NH52 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.57□□□□□ -0.24
TVP23AA6NH52 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.57□□□□□ -0.24
TVP23AA6NH52 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TVP23AA6NH52 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TVP23AA6NH52 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TVP23AA6NH52 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.57□□□□□ -0.24
TVP23AA6NH52 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TVP23AA6NH52 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
TVP23AA6NH52 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.57□□□□□ -0.24
TVP23AA6NH52 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.57□□□□□ -0.24
TVP23AA6NH52 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TVP23AA6NH52 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TVP23AA6NH52 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TVP23AA6NH52 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TVP23AA6NH52 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.57□□□□□ -0.24
TVP23AA6NH52 CICP4-201ENST00000447359 2812 ntBASIC13.57□□□□□ -0.24
TVP23AA6NH52 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.57□□□□□ -0.24
TVP23AA6NH52 AC104581.4-201ENST00000623126 3052 ntBASIC13.57□□□□□ -0.24
TVP23AA6NH52 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TVP23AA6NH52 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.57□□□□□ -0.24
TVP23AA6NH52 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
TVP23AA6NH52 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TVP23AA6NH52 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TVP23AA6NH52 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TVP23AA6NH52 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TVP23AA6NH52 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.57□□□□□ -0.24
TVP23AA6NH52 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TVP23AA6NH52 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TVP23AA6NH52 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TVP23AA6NH52 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TVP23AA6NH52 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TVP23AA6NH52 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TVP23AA6NH52 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TVP23AA6NH52 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
TVP23AA6NH52 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TVP23AA6NH52 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TVP23AA6NH52 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
TVP23AA6NH52 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TVP23AA6NH52 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TVP23AA6NH52 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TVP23AA6NH52 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TVP23AA6NH52 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TVP23AA6NH52 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TVP23AA6NH52 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.56□□□□□ -0.24
TVP23AA6NH52 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TVP23AA6NH52 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TVP23AA6NH52 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TVP23AA6NH52 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TVP23AA6NH52 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TVP23AA6NH52 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TVP23AA6NH52 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TVP23AA6NH52 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.56□□□□□ -0.24
TVP23AA6NH52 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.56□□□□□ -0.24
TVP23AA6NH52 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.56□□□□□ -0.24
TVP23AA6NH52 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.56□□□□□ -0.24
TVP23AA6NH52 SPDYE18-201ENST00000510091 1050 ntBASIC13.56□□□□□ -0.24
TVP23AA6NH52 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.56□□□□□ -0.24
TVP23AA6NH52 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TVP23AA6NH52 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.56□□□□□ -0.24
TVP23AA6NH52 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
TVP23AA6NH52 DUX4L27-201ENST00000554796 1261 ntBASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms