Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 RPL5P21-201ENST00000404620 815 ntBASIC16.5■□□□□ 0.23
CCDC66A2RUB6 AC004832.2-201ENST00000426397 482 ntBASIC16.5■□□□□ 0.23
CCDC66A2RUB6 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 AC015909.5-201ENST00000624336 2266 ntBASIC16.5■□□□□ 0.23
CCDC66A2RUB6 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
CCDC66A2RUB6 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 AL353705.2-201ENST00000428243 662 ntBASIC16.49■□□□□ 0.23
CCDC66A2RUB6 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 AMT-221ENST00000538581 2038 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC66A2RUB6 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC66A2RUB6 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CCDC66A2RUB6 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC66A2RUB6 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC66A2RUB6 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CCDC66A2RUB6 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CCDC66A2RUB6 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.48■□□□□ 0.23
CCDC66A2RUB6 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CCDC66A2RUB6 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC66A2RUB6 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC16.48■□□□□ 0.23
CCDC66A2RUB6 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.48■□□□□ 0.23
CCDC66A2RUB6 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC66A2RUB6 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CCDC66A2RUB6 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC66A2RUB6 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC66A2RUB6 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms