Protein–RNA interactions for Protein: Q9Y4C2

TCAF1, TRPM8 channel-associated factor 1, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCAF1Q9Y4C2 AL022069.1-201ENST00000568025 1636 ntBASIC23.12■■□□□ 1.29
TCAF1Q9Y4C2 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TCAF1Q9Y4C2 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
TCAF1Q9Y4C2 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TCAF1Q9Y4C2 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.12■■□□□ 1.29
TCAF1Q9Y4C2 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.12■■□□□ 1.29
TCAF1Q9Y4C2 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
TCAF1Q9Y4C2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.12■■□□□ 1.29
TCAF1Q9Y4C2 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.12■■□□□ 1.29
TCAF1Q9Y4C2 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TCAF1Q9Y4C2 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TCAF1Q9Y4C2 MIR4281-201ENST00000580852 62 ntBASIC23.11■■□□□ 1.29
TCAF1Q9Y4C2 AC131274.2-201ENST00000580697 1507 ntBASIC23.11■■□□□ 1.29
TCAF1Q9Y4C2 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
TCAF1Q9Y4C2 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TCAF1Q9Y4C2 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
TCAF1Q9Y4C2 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TCAF1Q9Y4C2 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
TCAF1Q9Y4C2 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.1■■□□□ 1.29
TCAF1Q9Y4C2 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
TCAF1Q9Y4C2 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TCAF1Q9Y4C2 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.1■■□□□ 1.29
TCAF1Q9Y4C2 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TCAF1Q9Y4C2 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.1■■□□□ 1.29
TCAF1Q9Y4C2 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.09■■□□□ 1.29
TCAF1Q9Y4C2 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TCAF1Q9Y4C2 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.09■■□□□ 1.29
TCAF1Q9Y4C2 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
TCAF1Q9Y4C2 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
TCAF1Q9Y4C2 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TCAF1Q9Y4C2 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
TCAF1Q9Y4C2 AC103834.1-201ENST00000520383 144 ntBASIC23.09■■□□□ 1.29
TCAF1Q9Y4C2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TCAF1Q9Y4C2 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TCAF1Q9Y4C2 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TCAF1Q9Y4C2 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
TCAF1Q9Y4C2 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TCAF1Q9Y4C2 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TCAF1Q9Y4C2 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TCAF1Q9Y4C2 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.08■■□□□ 1.29
TCAF1Q9Y4C2 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.08■■□□□ 1.29
TCAF1Q9Y4C2 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
TCAF1Q9Y4C2 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
TCAF1Q9Y4C2 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TCAF1Q9Y4C2 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TCAF1Q9Y4C2 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TCAF1Q9Y4C2 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TCAF1Q9Y4C2 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.28
TCAF1Q9Y4C2 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.08■■□□□ 1.28
TCAF1Q9Y4C2 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TCAF1Q9Y4C2 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.07■■□□□ 1.28
TCAF1Q9Y4C2 AF131216.4-201ENST00000638924 1588 ntBASIC23.07■■□□□ 1.28
TCAF1Q9Y4C2 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TCAF1Q9Y4C2 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.07■■□□□ 1.28
TCAF1Q9Y4C2 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.07■■□□□ 1.28
TCAF1Q9Y4C2 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.07■■□□□ 1.28
TCAF1Q9Y4C2 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.07■■□□□ 1.28
TCAF1Q9Y4C2 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.07■■□□□ 1.28
TCAF1Q9Y4C2 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TCAF1Q9Y4C2 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.06■■□□□ 1.28
TCAF1Q9Y4C2 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TCAF1Q9Y4C2 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TCAF1Q9Y4C2 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TCAF1Q9Y4C2 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
TCAF1Q9Y4C2 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.06■■□□□ 1.28
TCAF1Q9Y4C2 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.06■■□□□ 1.28
TCAF1Q9Y4C2 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23.06■■□□□ 1.28
TCAF1Q9Y4C2 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC23.06■■□□□ 1.28
TCAF1Q9Y4C2 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TCAF1Q9Y4C2 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TCAF1Q9Y4C2 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.05■■□□□ 1.28
TCAF1Q9Y4C2 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TCAF1Q9Y4C2 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TCAF1Q9Y4C2 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.05■■□□□ 1.28
TCAF1Q9Y4C2 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.05■■□□□ 1.28
TCAF1Q9Y4C2 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.05■■□□□ 1.28
TCAF1Q9Y4C2 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
TCAF1Q9Y4C2 KRT8P33-201ENST00000508125 1423 ntBASIC23.05■■□□□ 1.28
TCAF1Q9Y4C2 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TCAF1Q9Y4C2 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TCAF1Q9Y4C2 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.05■■□□□ 1.28
TCAF1Q9Y4C2 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.04■■□□□ 1.28
TCAF1Q9Y4C2 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
TCAF1Q9Y4C2 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.04■■□□□ 1.28
TCAF1Q9Y4C2 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TCAF1Q9Y4C2 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
TCAF1Q9Y4C2 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TCAF1Q9Y4C2 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TCAF1Q9Y4C2 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.04■■□□□ 1.28
TCAF1Q9Y4C2 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.03■■□□□ 1.28
TCAF1Q9Y4C2 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TCAF1Q9Y4C2 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TCAF1Q9Y4C2 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TCAF1Q9Y4C2 YBX1P4-201ENST00000392794 808 ntBASIC23.02■■□□□ 1.28
TCAF1Q9Y4C2 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.02■■□□□ 1.28
TCAF1Q9Y4C2 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TCAF1Q9Y4C2 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
TCAF1Q9Y4C2 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
TCAF1Q9Y4C2 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TCAF1Q9Y4C2 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms