Protein–RNA interactions for Protein: Q9Y2R2

PTPN22, Tyrosine-protein phosphatase non-receptor type 22, humanhuman

Predictions only

Length 807 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22Q9Y2R2 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.53■■□□□ 1.84
PTPN22Q9Y2R2 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
PTPN22Q9Y2R2 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
PTPN22Q9Y2R2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC26.53■■□□□ 1.84
PTPN22Q9Y2R2 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC26.53■■□□□ 1.84
PTPN22Q9Y2R2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
PTPN22Q9Y2R2 AC099791.2-201ENST00000605725 427 ntBASIC26.53■■□□□ 1.84
PTPN22Q9Y2R2 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PTPN22Q9Y2R2 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.53■■□□□ 1.84
PTPN22Q9Y2R2 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PTPN22Q9Y2R2 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
PTPN22Q9Y2R2 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.52■■□□□ 1.84
PTPN22Q9Y2R2 DLX3-202ENST00000512495 834 ntTSL 2 BASIC26.52■■□□□ 1.84
PTPN22Q9Y2R2 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
PTPN22Q9Y2R2 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
PTPN22Q9Y2R2 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
PTPN22Q9Y2R2 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC26.51■■□□□ 1.83
PTPN22Q9Y2R2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
PTPN22Q9Y2R2 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC26.51■■□□□ 1.83
PTPN22Q9Y2R2 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
PTPN22Q9Y2R2 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
PTPN22Q9Y2R2 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
PTPN22Q9Y2R2 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC26.5■■□□□ 1.83
PTPN22Q9Y2R2 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PTPN22Q9Y2R2 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
PTPN22Q9Y2R2 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PTPN22Q9Y2R2 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC26.5■■□□□ 1.83
PTPN22Q9Y2R2 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC26.5■■□□□ 1.83
PTPN22Q9Y2R2 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC26.5■■□□□ 1.83
PTPN22Q9Y2R2 AL031602.1-201ENST00000633169 911 ntBASIC26.5■■□□□ 1.83
PTPN22Q9Y2R2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC26.49■■□□□ 1.83
PTPN22Q9Y2R2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC26.49■■□□□ 1.83
PTPN22Q9Y2R2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC26.49■■□□□ 1.83
PTPN22Q9Y2R2 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
PTPN22Q9Y2R2 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.49■■□□□ 1.83
PTPN22Q9Y2R2 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PTPN22Q9Y2R2 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC26.49■■□□□ 1.83
PTPN22Q9Y2R2 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PTPN22Q9Y2R2 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC26.49■■□□□ 1.83
PTPN22Q9Y2R2 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
PTPN22Q9Y2R2 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
PTPN22Q9Y2R2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PTPN22Q9Y2R2 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
PTPN22Q9Y2R2 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC26.48■■□□□ 1.83
PTPN22Q9Y2R2 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC26.48■■□□□ 1.83
PTPN22Q9Y2R2 MPST-208ENST00000628507 698 ntTSL 5 BASIC26.48■■□□□ 1.83
PTPN22Q9Y2R2 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
PTPN22Q9Y2R2 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PTPN22Q9Y2R2 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
PTPN22Q9Y2R2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PTPN22Q9Y2R2 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
PTPN22Q9Y2R2 YBX1P1-201ENST00000445822 960 ntBASIC26.47■■□□□ 1.83
PTPN22Q9Y2R2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC26.47■■□□□ 1.83
PTPN22Q9Y2R2 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.47■■□□□ 1.83
PTPN22Q9Y2R2 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.46■■□□□ 1.83
PTPN22Q9Y2R2 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
PTPN22Q9Y2R2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PTPN22Q9Y2R2 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PTPN22Q9Y2R2 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC26.46■■□□□ 1.83
PTPN22Q9Y2R2 DUX4L2-201ENST00000561772 1275 ntBASIC26.46■■□□□ 1.83
PTPN22Q9Y2R2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC26.46■■□□□ 1.83
PTPN22Q9Y2R2 DUX4L6-201ENST00000626483 1275 ntBASIC26.46■■□□□ 1.83
PTPN22Q9Y2R2 DUX4L1-201ENST00000627662 1275 ntBASIC26.46■■□□□ 1.83
PTPN22Q9Y2R2 DUX4L8-201ENST00000629013 1275 ntBASIC26.46■■□□□ 1.83
PTPN22Q9Y2R2 DUX4L3-201ENST00000630187 1275 ntBASIC26.46■■□□□ 1.83
PTPN22Q9Y2R2 DUX4L7-201ENST00000630678 1275 ntBASIC26.46■■□□□ 1.83
PTPN22Q9Y2R2 DUX4L5-201ENST00000630834 1275 ntBASIC26.46■■□□□ 1.83
PTPN22Q9Y2R2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC26.46■■□□□ 1.83
PTPN22Q9Y2R2 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PTPN22Q9Y2R2 LINC01003-201ENST00000564834 1764 ntBASIC26.46■■□□□ 1.83
PTPN22Q9Y2R2 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
PTPN22Q9Y2R2 AC233992.3-201ENST00000607491 485 ntBASIC26.45■■□□□ 1.82
PTPN22Q9Y2R2 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
PTPN22Q9Y2R2 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC26.44■■□□□ 1.82
PTPN22Q9Y2R2 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
PTPN22Q9Y2R2 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PTPN22Q9Y2R2 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
PTPN22Q9Y2R2 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
PTPN22Q9Y2R2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PTPN22Q9Y2R2 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PTPN22Q9Y2R2 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC26.44■■□□□ 1.82
PTPN22Q9Y2R2 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC26.44■■□□□ 1.82
PTPN22Q9Y2R2 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
PTPN22Q9Y2R2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC26.44■■□□□ 1.82
PTPN22Q9Y2R2 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.44■■□□□ 1.82
PTPN22Q9Y2R2 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PTPN22Q9Y2R2 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
PTPN22Q9Y2R2 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
PTPN22Q9Y2R2 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PTPN22Q9Y2R2 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PTPN22Q9Y2R2 HES6-206ENST00000409574 738 ntTSL 2 BASIC26.43■■□□□ 1.82
PTPN22Q9Y2R2 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC26.43■■□□□ 1.82
PTPN22Q9Y2R2 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC26.43■■□□□ 1.82
PTPN22Q9Y2R2 AC136469.2-201ENST00000623944 1028 ntBASIC26.43■■□□□ 1.82
PTPN22Q9Y2R2 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
PTPN22Q9Y2R2 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
PTPN22Q9Y2R2 AP004609.3-201ENST00000610705 1884 ntBASIC26.42■■□□□ 1.82
PTPN22Q9Y2R2 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC26.42■■□□□ 1.82
PTPN22Q9Y2R2 GRAMD4P2-201ENST00000423297 1097 ntBASIC26.42■■□□□ 1.82
PTPN22Q9Y2R2 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC26.42■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms