Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC31.8■■■□□ 2.68
PHF8Q9UPP1 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
PHF8Q9UPP1 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC31.8■■■□□ 2.68
PHF8Q9UPP1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC31.79■■■□□ 2.68
PHF8Q9UPP1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC31.79■■■□□ 2.68
PHF8Q9UPP1 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC31.78■■■□□ 2.68
PHF8Q9UPP1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC31.78■■■□□ 2.68
PHF8Q9UPP1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC31.78■■■□□ 2.68
PHF8Q9UPP1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC31.78■■■□□ 2.68
PHF8Q9UPP1 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
PHF8Q9UPP1 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
PHF8Q9UPP1 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC31.77■■■□□ 2.68
PHF8Q9UPP1 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
PHF8Q9UPP1 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC31.77■■■□□ 2.68
PHF8Q9UPP1 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC31.76■■■□□ 2.68
PHF8Q9UPP1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
PHF8Q9UPP1 SHF-206ENST00000560471 2499 ntTSL 5 BASIC31.76■■■□□ 2.68
PHF8Q9UPP1 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC31.76■■■□□ 2.67
PHF8Q9UPP1 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
PHF8Q9UPP1 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
PHF8Q9UPP1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
PHF8Q9UPP1 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC31.76■■■□□ 2.67
PHF8Q9UPP1 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC31.76■■■□□ 2.67
PHF8Q9UPP1 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
PHF8Q9UPP1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
PHF8Q9UPP1 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
PHF8Q9UPP1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
PHF8Q9UPP1 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
PHF8Q9UPP1 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC31.75■■■□□ 2.67
PHF8Q9UPP1 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC31.74■■■□□ 2.67
PHF8Q9UPP1 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC31.74■■■□□ 2.67
PHF8Q9UPP1 AC136469.2-201ENST00000623944 1028 ntBASIC31.74■■■□□ 2.67
PHF8Q9UPP1 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC31.74■■■□□ 2.67
PHF8Q9UPP1 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC31.73■■■□□ 2.67
PHF8Q9UPP1 HES6-206ENST00000409574 738 ntTSL 2 BASIC31.73■■■□□ 2.67
PHF8Q9UPP1 STK32C-205ENST00000456004 607 ntTSL 2 BASIC31.73■■■□□ 2.67
PHF8Q9UPP1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC31.73■■■□□ 2.67
PHF8Q9UPP1 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC31.73■■■□□ 2.67
PHF8Q9UPP1 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC31.73■■■□□ 2.67
PHF8Q9UPP1 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC31.73■■■□□ 2.67
PHF8Q9UPP1 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC31.72■■■□□ 2.67
PHF8Q9UPP1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
PHF8Q9UPP1 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
PHF8Q9UPP1 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC31.72■■■□□ 2.67
PHF8Q9UPP1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
PHF8Q9UPP1 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
PHF8Q9UPP1 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
PHF8Q9UPP1 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC31.71■■■□□ 2.67
PHF8Q9UPP1 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
PHF8Q9UPP1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
PHF8Q9UPP1 C17orf82-201ENST00000623772 1530 ntBASIC31.71■■■□□ 2.67
PHF8Q9UPP1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC31.71■■■□□ 2.67
PHF8Q9UPP1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
PHF8Q9UPP1 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
PHF8Q9UPP1 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC31.7■■■□□ 2.67
PHF8Q9UPP1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC31.7■■■□□ 2.67
PHF8Q9UPP1 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
PHF8Q9UPP1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.66
PHF8Q9UPP1 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC31.69■■■□□ 2.66
PHF8Q9UPP1 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC31.69■■■□□ 2.66
PHF8Q9UPP1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC31.69■■■□□ 2.66
PHF8Q9UPP1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC31.69■■■□□ 2.66
PHF8Q9UPP1 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC31.68■■■□□ 2.66
PHF8Q9UPP1 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC31.68■■■□□ 2.66
PHF8Q9UPP1 AC006455.2-201ENST00000429931 906 ntBASIC31.68■■■□□ 2.66
PHF8Q9UPP1 SP2-202ENST00000613139 908 ntTSL 5 BASIC31.68■■■□□ 2.66
PHF8Q9UPP1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC31.68■■■□□ 2.66
PHF8Q9UPP1 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
PHF8Q9UPP1 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC31.67■■■□□ 2.66
PHF8Q9UPP1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC31.67■■■□□ 2.66
PHF8Q9UPP1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
PHF8Q9UPP1 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
PHF8Q9UPP1 PKM-203ENST00000389093 2279 ntTSL 5 BASIC31.66■■■□□ 2.66
PHF8Q9UPP1 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
PHF8Q9UPP1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
PHF8Q9UPP1 AC233992.3-201ENST00000607491 485 ntBASIC31.66■■■□□ 2.66
PHF8Q9UPP1 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
PHF8Q9UPP1 AC241377.3-202ENST00000626088 1088 ntBASIC31.66■■■□□ 2.66
PHF8Q9UPP1 AC241585.3-202ENST00000628937 1088 ntBASIC31.66■■■□□ 2.66
PHF8Q9UPP1 AC245100.8-202ENST00000629247 1058 ntBASIC31.66■■■□□ 2.66
PHF8Q9UPP1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC31.66■■■□□ 2.66
PHF8Q9UPP1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
PHF8Q9UPP1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
PHF8Q9UPP1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
PHF8Q9UPP1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
PHF8Q9UPP1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
PHF8Q9UPP1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC31.65■■■□□ 2.66
PHF8Q9UPP1 MPST-208ENST00000628507 698 ntTSL 5 BASIC31.65■■■□□ 2.66
PHF8Q9UPP1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC31.65■■■□□ 2.66
PHF8Q9UPP1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC31.64■■■□□ 2.66
PHF8Q9UPP1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC31.64■■■□□ 2.66
PHF8Q9UPP1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC31.64■■■□□ 2.66
PHF8Q9UPP1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
PHF8Q9UPP1 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC31.63■■■□□ 2.65
PHF8Q9UPP1 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
PHF8Q9UPP1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC31.63■■■□□ 2.65
PHF8Q9UPP1 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC31.63■■■□□ 2.65
PHF8Q9UPP1 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
PHF8Q9UPP1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC31.63■■■□□ 2.65
PHF8Q9UPP1 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms