Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
LHX6Q9UPM6 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LHX6Q9UPM6 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.74■■□□□ 1.07
LHX6Q9UPM6 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.74■■□□□ 1.07
LHX6Q9UPM6 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.74■■□□□ 1.07
LHX6Q9UPM6 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LHX6Q9UPM6 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LHX6Q9UPM6 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.74■■□□□ 1.07
LHX6Q9UPM6 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
LHX6Q9UPM6 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.73■■□□□ 1.07
LHX6Q9UPM6 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LHX6Q9UPM6 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LHX6Q9UPM6 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.73■■□□□ 1.07
LHX6Q9UPM6 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LHX6Q9UPM6 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LHX6Q9UPM6 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LHX6Q9UPM6 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LHX6Q9UPM6 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LHX6Q9UPM6 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
LHX6Q9UPM6 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.72■■□□□ 1.07
LHX6Q9UPM6 AP004609.3-201ENST00000610705 1884 ntBASIC21.72■■□□□ 1.07
LHX6Q9UPM6 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
LHX6Q9UPM6 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LHX6Q9UPM6 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
LHX6Q9UPM6 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LHX6Q9UPM6 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.71■■□□□ 1.07
LHX6Q9UPM6 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.71■■□□□ 1.07
LHX6Q9UPM6 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.71■■□□□ 1.07
LHX6Q9UPM6 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LHX6Q9UPM6 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LHX6Q9UPM6 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.71■■□□□ 1.07
LHX6Q9UPM6 AC011298.3-201ENST00000615796 283 ntBASIC21.71■■□□□ 1.07
LHX6Q9UPM6 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.71■■□□□ 1.07
LHX6Q9UPM6 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LHX6Q9UPM6 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LHX6Q9UPM6 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
LHX6Q9UPM6 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
LHX6Q9UPM6 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
LHX6Q9UPM6 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
LHX6Q9UPM6 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
LHX6Q9UPM6 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
LHX6Q9UPM6 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LHX6Q9UPM6 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
LHX6Q9UPM6 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
LHX6Q9UPM6 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.7■■□□□ 1.06
LHX6Q9UPM6 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
LHX6Q9UPM6 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
LHX6Q9UPM6 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
LHX6Q9UPM6 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
LHX6Q9UPM6 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.69■■□□□ 1.06
LHX6Q9UPM6 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LHX6Q9UPM6 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LHX6Q9UPM6 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.69■■□□□ 1.06
LHX6Q9UPM6 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.69■■□□□ 1.06
LHX6Q9UPM6 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.69■■□□□ 1.06
LHX6Q9UPM6 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
LHX6Q9UPM6 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.68■■□□□ 1.06
LHX6Q9UPM6 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LHX6Q9UPM6 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.68■■□□□ 1.06
LHX6Q9UPM6 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
LHX6Q9UPM6 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.68■■□□□ 1.06
LHX6Q9UPM6 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.68■■□□□ 1.06
LHX6Q9UPM6 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LHX6Q9UPM6 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LHX6Q9UPM6 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
LHX6Q9UPM6 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
LHX6Q9UPM6 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LHX6Q9UPM6 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LHX6Q9UPM6 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LHX6Q9UPM6 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.67■■□□□ 1.06
LHX6Q9UPM6 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
LHX6Q9UPM6 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.67■■□□□ 1.06
LHX6Q9UPM6 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.67■■□□□ 1.06
LHX6Q9UPM6 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.67■■□□□ 1.06
LHX6Q9UPM6 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.67■■□□□ 1.06
LHX6Q9UPM6 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
LHX6Q9UPM6 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
LHX6Q9UPM6 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LHX6Q9UPM6 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.66■■□□□ 1.06
LHX6Q9UPM6 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.66■■□□□ 1.06
LHX6Q9UPM6 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LHX6Q9UPM6 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.66■■□□□ 1.06
LHX6Q9UPM6 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.66■■□□□ 1.06
LHX6Q9UPM6 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.66■■□□□ 1.06
LHX6Q9UPM6 AC245100.8-202ENST00000629247 1058 ntBASIC21.66■■□□□ 1.06
LHX6Q9UPM6 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LHX6Q9UPM6 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LHX6Q9UPM6 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
LHX6Q9UPM6 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
LHX6Q9UPM6 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.65■■□□□ 1.06
LHX6Q9UPM6 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.65■■□□□ 1.06
LHX6Q9UPM6 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.65■■□□□ 1.06
LHX6Q9UPM6 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.65■■□□□ 1.06
LHX6Q9UPM6 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LHX6Q9UPM6 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.65■■□□□ 1.06
LHX6Q9UPM6 AL138724.1-201ENST00000606771 1088 ntBASIC21.65■■□□□ 1.06
LHX6Q9UPM6 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.65■■□□□ 1.06
LHX6Q9UPM6 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.65■■□□□ 1.06
LHX6Q9UPM6 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.65■■□□□ 1.06
LHX6Q9UPM6 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms