Protein–RNA interactions for Protein: Q9NRG0

CHRAC1, Chromatin accessibility complex protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRAC1Q9NRG0 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CHRAC1Q9NRG0 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
CHRAC1Q9NRG0 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHRAC1Q9NRG0 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHRAC1Q9NRG0 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.16■■□□□ 1.3
CHRAC1Q9NRG0 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC23.16■■□□□ 1.3
CHRAC1Q9NRG0 AC120024.1-201ENST00000562672 995 ntBASIC23.16■■□□□ 1.3
CHRAC1Q9NRG0 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
CHRAC1Q9NRG0 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
CHRAC1Q9NRG0 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CHRAC1Q9NRG0 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CHRAC1Q9NRG0 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.15■■□□□ 1.3
CHRAC1Q9NRG0 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.15■■□□□ 1.3
CHRAC1Q9NRG0 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
CHRAC1Q9NRG0 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.15■■□□□ 1.3
CHRAC1Q9NRG0 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CHRAC1Q9NRG0 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CHRAC1Q9NRG0 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.14■■□□□ 1.3
CHRAC1Q9NRG0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CHRAC1Q9NRG0 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CHRAC1Q9NRG0 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
CHRAC1Q9NRG0 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CHRAC1Q9NRG0 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.14■■□□□ 1.29
CHRAC1Q9NRG0 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.14■■□□□ 1.29
CHRAC1Q9NRG0 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CHRAC1Q9NRG0 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CHRAC1Q9NRG0 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
CHRAC1Q9NRG0 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CHRAC1Q9NRG0 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CHRAC1Q9NRG0 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
CHRAC1Q9NRG0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CHRAC1Q9NRG0 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.13■■□□□ 1.29
CHRAC1Q9NRG0 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.13■■□□□ 1.29
CHRAC1Q9NRG0 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
CHRAC1Q9NRG0 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.13■■□□□ 1.29
CHRAC1Q9NRG0 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CHRAC1Q9NRG0 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CHRAC1Q9NRG0 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CHRAC1Q9NRG0 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC23.12■■□□□ 1.29
CHRAC1Q9NRG0 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC23.12■■□□□ 1.29
CHRAC1Q9NRG0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.12■■□□□ 1.29
CHRAC1Q9NRG0 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CHRAC1Q9NRG0 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
CHRAC1Q9NRG0 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CHRAC1Q9NRG0 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.11■■□□□ 1.29
CHRAC1Q9NRG0 KRT18P24-201ENST00000344739 1156 ntBASIC23.11■■□□□ 1.29
CHRAC1Q9NRG0 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CHRAC1Q9NRG0 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CHRAC1Q9NRG0 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.11■■□□□ 1.29
CHRAC1Q9NRG0 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
CHRAC1Q9NRG0 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC23.11■■□□□ 1.29
CHRAC1Q9NRG0 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CHRAC1Q9NRG0 AL022069.1-201ENST00000568025 1636 ntBASIC23.11■■□□□ 1.29
CHRAC1Q9NRG0 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
CHRAC1Q9NRG0 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.1■■□□□ 1.29
CHRAC1Q9NRG0 AL161729.1-201ENST00000604104 1402 ntBASIC23.1■■□□□ 1.29
CHRAC1Q9NRG0 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
CHRAC1Q9NRG0 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.1■■□□□ 1.29
CHRAC1Q9NRG0 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CHRAC1Q9NRG0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.1■■□□□ 1.29
CHRAC1Q9NRG0 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHRAC1Q9NRG0 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHRAC1Q9NRG0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.1■■□□□ 1.29
CHRAC1Q9NRG0 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CHRAC1Q9NRG0 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CHRAC1Q9NRG0 AC131274.2-201ENST00000580697 1507 ntBASIC23.09■■□□□ 1.29
CHRAC1Q9NRG0 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
CHRAC1Q9NRG0 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
CHRAC1Q9NRG0 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.09■■□□□ 1.29
CHRAC1Q9NRG0 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CHRAC1Q9NRG0 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.09■■□□□ 1.29
CHRAC1Q9NRG0 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.09■■□□□ 1.29
CHRAC1Q9NRG0 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.08■■□□□ 1.29
CHRAC1Q9NRG0 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CHRAC1Q9NRG0 THA1P-201ENST00000590384 1145 ntBASIC23.08■■□□□ 1.29
CHRAC1Q9NRG0 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CHRAC1Q9NRG0 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CHRAC1Q9NRG0 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
CHRAC1Q9NRG0 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
CHRAC1Q9NRG0 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CHRAC1Q9NRG0 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.08■■□□□ 1.28
CHRAC1Q9NRG0 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
CHRAC1Q9NRG0 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.08■■□□□ 1.28
CHRAC1Q9NRG0 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CHRAC1Q9NRG0 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.07■■□□□ 1.28
CHRAC1Q9NRG0 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CHRAC1Q9NRG0 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CHRAC1Q9NRG0 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
CHRAC1Q9NRG0 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CHRAC1Q9NRG0 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.07■■□□□ 1.28
CHRAC1Q9NRG0 AC103834.1-201ENST00000520383 144 ntBASIC23.07■■□□□ 1.28
CHRAC1Q9NRG0 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.07■■□□□ 1.28
CHRAC1Q9NRG0 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.07■■□□□ 1.28
CHRAC1Q9NRG0 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CHRAC1Q9NRG0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CHRAC1Q9NRG0 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CHRAC1Q9NRG0 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CHRAC1Q9NRG0 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CHRAC1Q9NRG0 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CHRAC1Q9NRG0 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms