Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
HINT3Q9NQE9 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.73■□□□□ 0.91
HINT3Q9NQE9 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.73■□□□□ 0.91
HINT3Q9NQE9 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
HINT3Q9NQE9 AC129492.7-201ENST00000622992 756 ntBASIC20.73■□□□□ 0.91
HINT3Q9NQE9 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HINT3Q9NQE9 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HINT3Q9NQE9 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
HINT3Q9NQE9 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HINT3Q9NQE9 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
HINT3Q9NQE9 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HINT3Q9NQE9 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
HINT3Q9NQE9 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
HINT3Q9NQE9 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HINT3Q9NQE9 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.72■□□□□ 0.91
HINT3Q9NQE9 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
HINT3Q9NQE9 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HINT3Q9NQE9 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HINT3Q9NQE9 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HINT3Q9NQE9 AC079834.2-201ENST00000609776 1949 ntBASIC20.72■□□□□ 0.91
HINT3Q9NQE9 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HINT3Q9NQE9 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HINT3Q9NQE9 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HINT3Q9NQE9 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HINT3Q9NQE9 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HINT3Q9NQE9 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HINT3Q9NQE9 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HINT3Q9NQE9 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
HINT3Q9NQE9 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HINT3Q9NQE9 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
HINT3Q9NQE9 TSPY13P-201ENST00000338964 914 ntBASIC20.71■□□□□ 0.91
HINT3Q9NQE9 AC004987.1-201ENST00000428627 508 ntBASIC20.71■□□□□ 0.91
HINT3Q9NQE9 ATP5G2P3-201ENST00000429083 425 ntBASIC20.71■□□□□ 0.91
HINT3Q9NQE9 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.71■□□□□ 0.91
HINT3Q9NQE9 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
HINT3Q9NQE9 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
HINT3Q9NQE9 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HINT3Q9NQE9 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HINT3Q9NQE9 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.71■□□□□ 0.91
HINT3Q9NQE9 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HINT3Q9NQE9 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
HINT3Q9NQE9 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HINT3Q9NQE9 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HINT3Q9NQE9 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HINT3Q9NQE9 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HINT3Q9NQE9 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HINT3Q9NQE9 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HINT3Q9NQE9 AL033527.3-201ENST00000566366 1196 ntBASIC20.7■□□□□ 0.9
HINT3Q9NQE9 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
HINT3Q9NQE9 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HINT3Q9NQE9 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HINT3Q9NQE9 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HINT3Q9NQE9 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.7■□□□□ 0.9
HINT3Q9NQE9 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
HINT3Q9NQE9 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HINT3Q9NQE9 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HINT3Q9NQE9 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
HINT3Q9NQE9 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HINT3Q9NQE9 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.69■□□□□ 0.9
HINT3Q9NQE9 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HINT3Q9NQE9 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HINT3Q9NQE9 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
HINT3Q9NQE9 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
HINT3Q9NQE9 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.68■□□□□ 0.9
HINT3Q9NQE9 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
HINT3Q9NQE9 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HINT3Q9NQE9 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HINT3Q9NQE9 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
HINT3Q9NQE9 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.67■□□□□ 0.9
HINT3Q9NQE9 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
HINT3Q9NQE9 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HINT3Q9NQE9 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HINT3Q9NQE9 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.67■□□□□ 0.9
HINT3Q9NQE9 DUX4L9-201ENST00000449051 1259 ntBASIC20.67■□□□□ 0.9
HINT3Q9NQE9 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HINT3Q9NQE9 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
HINT3Q9NQE9 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.67■□□□□ 0.9
HINT3Q9NQE9 AC018755.3-202ENST00000596210 929 ntBASIC20.67■□□□□ 0.9
HINT3Q9NQE9 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.67■□□□□ 0.9
HINT3Q9NQE9 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.67■□□□□ 0.9
HINT3Q9NQE9 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HINT3Q9NQE9 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.67■□□□□ 0.9
HINT3Q9NQE9 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
HINT3Q9NQE9 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HINT3Q9NQE9 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
HINT3Q9NQE9 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HINT3Q9NQE9 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HINT3Q9NQE9 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.66■□□□□ 0.9
HINT3Q9NQE9 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
HINT3Q9NQE9 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HINT3Q9NQE9 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HINT3Q9NQE9 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HINT3Q9NQE9 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HINT3Q9NQE9 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HINT3Q9NQE9 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.65■□□□□ 0.9
HINT3Q9NQE9 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HINT3Q9NQE9 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HINT3Q9NQE9 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HINT3Q9NQE9 DUX4L18-201ENST00000553347 1267 ntBASIC20.65■□□□□ 0.9
HINT3Q9NQE9 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms