Protein–RNA interactions for Protein: Q9HCF6

TRPM3, Transient receptor potential cation channel subfamily M member 3, humanhuman

Predicted RBP Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3Q9HCF6 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC31.52■■■□□ 2.64
TRPM3Q9HCF6 AC006455.2-201ENST00000429931 906 ntBASIC31.52■■■□□ 2.64
TRPM3Q9HCF6 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC31.52■■■□□ 2.64
TRPM3Q9HCF6 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC31.52■■■□□ 2.64
TRPM3Q9HCF6 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
TRPM3Q9HCF6 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC31.51■■■□□ 2.63
TRPM3Q9HCF6 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
TRPM3Q9HCF6 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC31.51■■■□□ 2.63
TRPM3Q9HCF6 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
TRPM3Q9HCF6 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
TRPM3Q9HCF6 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
TRPM3Q9HCF6 IRS3P-201ENST00000223076 1006 ntBASIC31.5■■■□□ 2.63
TRPM3Q9HCF6 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC31.5■■■□□ 2.63
TRPM3Q9HCF6 AC008764.7-201ENST00000593779 1081 ntBASIC31.5■■■□□ 2.63
TRPM3Q9HCF6 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
TRPM3Q9HCF6 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
TRPM3Q9HCF6 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
TRPM3Q9HCF6 SNX3-202ENST00000349379 890 ntTSL 2 BASIC31.49■■■□□ 2.63
TRPM3Q9HCF6 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC31.49■■■□□ 2.63
TRPM3Q9HCF6 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
TRPM3Q9HCF6 AC009102.2-201ENST00000606772 1639 ntBASIC31.48■■■□□ 2.63
TRPM3Q9HCF6 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
TRPM3Q9HCF6 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
TRPM3Q9HCF6 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC31.48■■■□□ 2.63
TRPM3Q9HCF6 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
TRPM3Q9HCF6 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC31.47■■■□□ 2.63
TRPM3Q9HCF6 REST-206ENST00000612429 1376 ntTSL 5 BASIC31.47■■■□□ 2.63
TRPM3Q9HCF6 REST-207ENST00000616975 1370 ntTSL 5 BASIC31.47■■■□□ 2.63
TRPM3Q9HCF6 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC31.47■■■□□ 2.63
TRPM3Q9HCF6 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC31.47■■■□□ 2.63
TRPM3Q9HCF6 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC31.47■■■□□ 2.63
TRPM3Q9HCF6 AC090192.1-201ENST00000517740 490 ntBASIC31.46■■■□□ 2.63
TRPM3Q9HCF6 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC31.46■■■□□ 2.63
TRPM3Q9HCF6 AL031602.1-201ENST00000633169 911 ntBASIC31.46■■■□□ 2.63
TRPM3Q9HCF6 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
TRPM3Q9HCF6 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
TRPM3Q9HCF6 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC31.46■■■□□ 2.63
TRPM3Q9HCF6 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
TRPM3Q9HCF6 IKBKGP1-201ENST00000612193 1073 ntBASIC31.46■■■□□ 2.63
TRPM3Q9HCF6 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
TRPM3Q9HCF6 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
TRPM3Q9HCF6 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC31.45■■■□□ 2.63
TRPM3Q9HCF6 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
TRPM3Q9HCF6 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC31.44■■■□□ 2.62
TRPM3Q9HCF6 MIR6089-201ENST00000616698 64 ntBASIC31.44■■■□□ 2.62
TRPM3Q9HCF6 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
TRPM3Q9HCF6 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
TRPM3Q9HCF6 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
TRPM3Q9HCF6 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC31.44■■■□□ 2.62
TRPM3Q9HCF6 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC31.44■■■□□ 2.62
TRPM3Q9HCF6 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
TRPM3Q9HCF6 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
TRPM3Q9HCF6 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
TRPM3Q9HCF6 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
TRPM3Q9HCF6 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC31.43■■■□□ 2.62
TRPM3Q9HCF6 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC31.43■■■□□ 2.62
TRPM3Q9HCF6 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
TRPM3Q9HCF6 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
TRPM3Q9HCF6 KRT18P5-201ENST00000436075 1291 ntBASIC31.43■■■□□ 2.62
TRPM3Q9HCF6 GLI3-203ENST00000437480 451 ntTSL 2 BASIC31.43■■■□□ 2.62
TRPM3Q9HCF6 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
TRPM3Q9HCF6 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
TRPM3Q9HCF6 SP2-202ENST00000613139 908 ntTSL 5 BASIC31.42■■■□□ 2.62
TRPM3Q9HCF6 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
TRPM3Q9HCF6 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
TRPM3Q9HCF6 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
TRPM3Q9HCF6 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC31.41■■■□□ 2.62
TRPM3Q9HCF6 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC31.41■■■□□ 2.62
TRPM3Q9HCF6 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC31.41■■■□□ 2.62
TRPM3Q9HCF6 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
TRPM3Q9HCF6 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
TRPM3Q9HCF6 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC31.41■■■□□ 2.62
TRPM3Q9HCF6 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC31.4■■■□□ 2.62
TRPM3Q9HCF6 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
TRPM3Q9HCF6 HES6-206ENST00000409574 738 ntTSL 2 BASIC31.4■■■□□ 2.62
TRPM3Q9HCF6 STK32C-205ENST00000456004 607 ntTSL 2 BASIC31.4■■■□□ 2.62
TRPM3Q9HCF6 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
TRPM3Q9HCF6 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
TRPM3Q9HCF6 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
TRPM3Q9HCF6 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC31.39■■■□□ 2.62
TRPM3Q9HCF6 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC31.39■■■□□ 2.62
TRPM3Q9HCF6 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
TRPM3Q9HCF6 AC034268.1-201ENST00000441047 882 ntBASIC31.38■■■□□ 2.61
TRPM3Q9HCF6 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC31.38■■■□□ 2.61
TRPM3Q9HCF6 RARRES2P11-201ENST00000635158 484 ntBASIC31.38■■■□□ 2.61
TRPM3Q9HCF6 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
TRPM3Q9HCF6 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
TRPM3Q9HCF6 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC31.38■■■□□ 2.61
TRPM3Q9HCF6 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
TRPM3Q9HCF6 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC31.38■■■□□ 2.61
TRPM3Q9HCF6 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC31.38■■■□□ 2.61
TRPM3Q9HCF6 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
TRPM3Q9HCF6 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC31.37■■■□□ 2.61
TRPM3Q9HCF6 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC31.37■■■□□ 2.61
TRPM3Q9HCF6 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
TRPM3Q9HCF6 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC31.37■■■□□ 2.61
TRPM3Q9HCF6 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
TRPM3Q9HCF6 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
TRPM3Q9HCF6 AC092437.1-201ENST00000624794 1048 ntBASIC31.37■■■□□ 2.61
TRPM3Q9HCF6 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC31.36■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms