Protein–RNA interactions for Protein: Q9H3S7

PTPN23, Tyrosine-protein phosphatase non-receptor type 23, humanhuman

Predictions only

Length 1,636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23Q9H3S7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC35.11■■■■□ 3.21
PTPN23Q9H3S7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC35.1■■■■□ 3.21
PTPN23Q9H3S7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC35.1■■■■□ 3.21
PTPN23Q9H3S7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
PTPN23Q9H3S7 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC35.1■■■■□ 3.21
PTPN23Q9H3S7 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC35.1■■■■□ 3.21
PTPN23Q9H3S7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC35.09■■■■□ 3.21
PTPN23Q9H3S7 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC35.09■■■■□ 3.21
PTPN23Q9H3S7 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC35.09■■■■□ 3.21
PTPN23Q9H3S7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
PTPN23Q9H3S7 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC35.09■■■■□ 3.21
PTPN23Q9H3S7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC35.08■■■■□ 3.21
PTPN23Q9H3S7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC35.07■■■■□ 3.21
PTPN23Q9H3S7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.21
PTPN23Q9H3S7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC35.07■■■■□ 3.2
PTPN23Q9H3S7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC35.07■■■■□ 3.2
PTPN23Q9H3S7 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC35.07■■■■□ 3.2
PTPN23Q9H3S7 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
PTPN23Q9H3S7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC35.06■■■■□ 3.2
PTPN23Q9H3S7 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC35.06■■■■□ 3.2
PTPN23Q9H3S7 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
PTPN23Q9H3S7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC35.06■■■■□ 3.2
PTPN23Q9H3S7 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC35.06■■■■□ 3.2
PTPN23Q9H3S7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC35.05■■■■□ 3.2
PTPN23Q9H3S7 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
PTPN23Q9H3S7 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC35.05■■■■□ 3.2
PTPN23Q9H3S7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC35.05■■■■□ 3.2
PTPN23Q9H3S7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
PTPN23Q9H3S7 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC35.05■■■■□ 3.2
PTPN23Q9H3S7 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC35.04■■■■□ 3.2
PTPN23Q9H3S7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC35.04■■■■□ 3.2
PTPN23Q9H3S7 AL022069.1-201ENST00000568025 1636 ntBASIC35.04■■■■□ 3.2
PTPN23Q9H3S7 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
PTPN23Q9H3S7 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
PTPN23Q9H3S7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
PTPN23Q9H3S7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC35.03■■■■□ 3.2
PTPN23Q9H3S7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC35.02■■■■□ 3.2
PTPN23Q9H3S7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC35.02■■■■□ 3.2
PTPN23Q9H3S7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC35.02■■■■□ 3.2
PTPN23Q9H3S7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC35.02■■■■□ 3.2
PTPN23Q9H3S7 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC35.02■■■■□ 3.2
PTPN23Q9H3S7 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC35.02■■■■□ 3.2
PTPN23Q9H3S7 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC35.02■■■■□ 3.2
PTPN23Q9H3S7 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC35.02■■■■□ 3.2
PTPN23Q9H3S7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC35.02■■■■□ 3.2
PTPN23Q9H3S7 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
PTPN23Q9H3S7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC35.02■■■■□ 3.2
PTPN23Q9H3S7 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.2
PTPN23Q9H3S7 HLA-L-211ENST00000482052 1765 ntBASIC35.01■■■■□ 3.2
PTPN23Q9H3S7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC35.01■■■■□ 3.2
PTPN23Q9H3S7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC35.01■■■■□ 3.19
PTPN23Q9H3S7 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC35■■■■□ 3.19
PTPN23Q9H3S7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC35■■■■□ 3.19
PTPN23Q9H3S7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC35■■■■□ 3.19
PTPN23Q9H3S7 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
PTPN23Q9H3S7 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
PTPN23Q9H3S7 REST-206ENST00000612429 1376 ntTSL 5 BASIC35■■■■□ 3.19
PTPN23Q9H3S7 REST-207ENST00000616975 1370 ntTSL 5 BASIC35■■■■□ 3.19
PTPN23Q9H3S7 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC34.99■■■■□ 3.19
PTPN23Q9H3S7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC34.99■■■■□ 3.19
PTPN23Q9H3S7 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC34.99■■■■□ 3.19
PTPN23Q9H3S7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC34.99■■■■□ 3.19
PTPN23Q9H3S7 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
PTPN23Q9H3S7 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC34.99■■■■□ 3.19
PTPN23Q9H3S7 AC106739.1-201ENST00000617035 715 ntBASIC34.99■■■■□ 3.19
PTPN23Q9H3S7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC34.98■■■■□ 3.19
PTPN23Q9H3S7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC34.98■■■■□ 3.19
PTPN23Q9H3S7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC34.98■■■■□ 3.19
PTPN23Q9H3S7 AL031432.3-201ENST00000607698 485 ntBASIC34.98■■■■□ 3.19
PTPN23Q9H3S7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC34.97■■■■□ 3.19
PTPN23Q9H3S7 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
PTPN23Q9H3S7 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC34.97■■■■□ 3.19
PTPN23Q9H3S7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC34.97■■■■□ 3.19
PTPN23Q9H3S7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC34.97■■■■□ 3.19
PTPN23Q9H3S7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
PTPN23Q9H3S7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC34.96■■■■□ 3.19
PTPN23Q9H3S7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC34.96■■■■□ 3.19
PTPN23Q9H3S7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC34.96■■■■□ 3.19
PTPN23Q9H3S7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC34.96■■■■□ 3.19
PTPN23Q9H3S7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC34.96■■■■□ 3.19
PTPN23Q9H3S7 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC34.96■■■■□ 3.19
PTPN23Q9H3S7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC34.96■■■■□ 3.19
PTPN23Q9H3S7 SRD5A1P1-201ENST00000442297 786 ntBASIC34.95■■■■□ 3.19
PTPN23Q9H3S7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC34.95■■■■□ 3.19
PTPN23Q9H3S7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC34.95■■■■□ 3.19
PTPN23Q9H3S7 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC34.95■■■■□ 3.19
PTPN23Q9H3S7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC34.95■■■■□ 3.19
PTPN23Q9H3S7 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC34.95■■■■□ 3.19
PTPN23Q9H3S7 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.19
PTPN23Q9H3S7 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC34.95■■■■□ 3.18
PTPN23Q9H3S7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.18
PTPN23Q9H3S7 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
PTPN23Q9H3S7 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC34.94■■■■□ 3.18
PTPN23Q9H3S7 AC133561.4-201ENST00000566112 224 ntBASIC34.94■■■■□ 3.18
PTPN23Q9H3S7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
PTPN23Q9H3S7 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
PTPN23Q9H3S7 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC34.93■■■■□ 3.18
PTPN23Q9H3S7 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
PTPN23Q9H3S7 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC34.93■■■■□ 3.18
PTPN23Q9H3S7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC34.93■■■■□ 3.18
Retrieved 100 of 98,524 protein–RNA pairs in 191.1 ms