Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ALX4Q9H161 HSD17B1P1-201ENST00000590052 955 ntBASIC19.39■□□□□ 0.69
ALX4Q9H161 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ALX4Q9H161 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ALX4Q9H161 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ALX4Q9H161 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ALX4Q9H161 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
ALX4Q9H161 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
ALX4Q9H161 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
ALX4Q9H161 AL024507.2-201ENST00000606070 2574 ntBASIC19.39■□□□□ 0.69
ALX4Q9H161 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.38■□□□□ 0.69
ALX4Q9H161 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
ALX4Q9H161 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ALX4Q9H161 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ALX4Q9H161 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ALX4Q9H161 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ALX4Q9H161 DUSP8P3-201ENST00000399571 1760 ntBASIC19.38■□□□□ 0.69
ALX4Q9H161 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ALX4Q9H161 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.38■□□□□ 0.69
ALX4Q9H161 GUSBP5-202ENST00000510805 1989 ntBASIC19.38■□□□□ 0.69
ALX4Q9H161 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ALX4Q9H161 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
ALX4Q9H161 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ALX4Q9H161 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
ALX4Q9H161 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ALX4Q9H161 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
ALX4Q9H161 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
ALX4Q9H161 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ALX4Q9H161 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ALX4Q9H161 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ALX4Q9H161 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.36■□□□□ 0.69
ALX4Q9H161 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ALX4Q9H161 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
ALX4Q9H161 GPX1-201ENST00000419349 1106 ntBASIC19.36■□□□□ 0.69
ALX4Q9H161 AC022413.1-201ENST00000624602 984 ntBASIC19.36■□□□□ 0.69
ALX4Q9H161 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
ALX4Q9H161 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ALX4Q9H161 C1orf229-201ENST00000623686 2258 ntBASIC19.36■□□□□ 0.69
ALX4Q9H161 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ALX4Q9H161 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ALX4Q9H161 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ALX4Q9H161 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ALX4Q9H161 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.35■□□□□ 0.69
ALX4Q9H161 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
ALX4Q9H161 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ALX4Q9H161 ANOS2P-203ENST00000472227 1816 ntBASIC19.35■□□□□ 0.69
ALX4Q9H161 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.35■□□□□ 0.69
ALX4Q9H161 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.35■□□□□ 0.69
ALX4Q9H161 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ALX4Q9H161 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ALX4Q9H161 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.35■□□□□ 0.69
ALX4Q9H161 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ALX4Q9H161 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
ALX4Q9H161 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ALX4Q9H161 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
ALX4Q9H161 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ALX4Q9H161 AC092068.2-201ENST00000590491 1708 ntBASIC19.34■□□□□ 0.69
ALX4Q9H161 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ALX4Q9H161 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
ALX4Q9H161 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
ALX4Q9H161 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ALX4Q9H161 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.34■□□□□ 0.69
ALX4Q9H161 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.34■□□□□ 0.69
ALX4Q9H161 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ALX4Q9H161 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.34■□□□□ 0.69
ALX4Q9H161 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.34■□□□□ 0.69
ALX4Q9H161 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
ALX4Q9H161 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ALX4Q9H161 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ALX4Q9H161 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ALX4Q9H161 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
ALX4Q9H161 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ALX4Q9H161 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ALX4Q9H161 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.33■□□□□ 0.68
ALX4Q9H161 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.33■□□□□ 0.68
ALX4Q9H161 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ALX4Q9H161 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
ALX4Q9H161 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.33■□□□□ 0.68
ALX4Q9H161 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.33■□□□□ 0.68
ALX4Q9H161 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ALX4Q9H161 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
ALX4Q9H161 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ALX4Q9H161 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
ALX4Q9H161 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
ALX4Q9H161 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ALX4Q9H161 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ALX4Q9H161 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.32■□□□□ 0.68
ALX4Q9H161 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
ALX4Q9H161 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ALX4Q9H161 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ALX4Q9H161 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ALX4Q9H161 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ALX4Q9H161 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.31■□□□□ 0.68
ALX4Q9H161 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.31■□□□□ 0.68
ALX4Q9H161 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ALX4Q9H161 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ALX4Q9H161 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.31■□□□□ 0.68
ALX4Q9H161 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.31■□□□□ 0.68
ALX4Q9H161 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
ALX4Q9H161 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms