Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.1■□□□□ 0.81
VRK1Q99986 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.1■□□□□ 0.81
VRK1Q99986 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VRK1Q99986 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VRK1Q99986 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VRK1Q99986 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VRK1Q99986 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VRK1Q99986 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VRK1Q99986 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VRK1Q99986 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VRK1Q99986 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.09■□□□□ 0.81
VRK1Q99986 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
VRK1Q99986 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.09■□□□□ 0.81
VRK1Q99986 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
VRK1Q99986 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.09■□□□□ 0.81
VRK1Q99986 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VRK1Q99986 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VRK1Q99986 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VRK1Q99986 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.08■□□□□ 0.81
VRK1Q99986 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
VRK1Q99986 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.08■□□□□ 0.81
VRK1Q99986 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.08■□□□□ 0.81
VRK1Q99986 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.08■□□□□ 0.81
VRK1Q99986 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.08■□□□□ 0.81
VRK1Q99986 AC137630.3-201ENST00000607245 391 ntBASIC20.08■□□□□ 0.81
VRK1Q99986 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
VRK1Q99986 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.08■□□□□ 0.8
VRK1Q99986 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
VRK1Q99986 FOXO3B-201ENST00000395675 1928 ntBASIC20.08■□□□□ 0.8
VRK1Q99986 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VRK1Q99986 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.07■□□□□ 0.8
VRK1Q99986 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VRK1Q99986 TSPY9P-201ENST00000440215 945 ntBASIC20.07■□□□□ 0.8
VRK1Q99986 TSPY11P-201ENST00000442607 1045 ntBASIC20.07■□□□□ 0.8
VRK1Q99986 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VRK1Q99986 MIR4281-201ENST00000580852 62 ntBASIC20.07■□□□□ 0.8
VRK1Q99986 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VRK1Q99986 AC022211.4-201ENST00000625094 2161 ntBASIC20.07■□□□□ 0.8
VRK1Q99986 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
VRK1Q99986 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
VRK1Q99986 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
VRK1Q99986 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.06■□□□□ 0.8
VRK1Q99986 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.06■□□□□ 0.8
VRK1Q99986 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VRK1Q99986 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VRK1Q99986 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.06■□□□□ 0.8
VRK1Q99986 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.06■□□□□ 0.8
VRK1Q99986 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
VRK1Q99986 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.06■□□□□ 0.8
VRK1Q99986 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VRK1Q99986 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VRK1Q99986 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
VRK1Q99986 AC097639.1-201ENST00000565519 1891 ntBASIC20.05■□□□□ 0.8
VRK1Q99986 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.05■□□□□ 0.8
VRK1Q99986 AC096887.2-201ENST00000623443 1957 ntBASIC20.05■□□□□ 0.8
VRK1Q99986 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
VRK1Q99986 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
VRK1Q99986 AC011551.1-201ENST00000614101 683 ntBASIC20.05■□□□□ 0.8
VRK1Q99986 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
VRK1Q99986 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VRK1Q99986 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
VRK1Q99986 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
VRK1Q99986 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
VRK1Q99986 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.05■□□□□ 0.8
VRK1Q99986 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VRK1Q99986 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VRK1Q99986 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VRK1Q99986 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VRK1Q99986 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VRK1Q99986 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.04■□□□□ 0.8
VRK1Q99986 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VRK1Q99986 CLDN5-201ENST00000403084 2357 ntBASIC20.03■□□□□ 0.8
VRK1Q99986 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
VRK1Q99986 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
VRK1Q99986 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VRK1Q99986 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VRK1Q99986 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
VRK1Q99986 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VRK1Q99986 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.03■□□□□ 0.8
VRK1Q99986 KRT16P3-201ENST00000439127 1283 ntBASIC20.03■□□□□ 0.8
VRK1Q99986 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.03■□□□□ 0.8
VRK1Q99986 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.03■□□□□ 0.8
VRK1Q99986 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
VRK1Q99986 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.03■□□□□ 0.8
VRK1Q99986 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
VRK1Q99986 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
VRK1Q99986 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.03■□□□□ 0.8
VRK1Q99986 AC021242.3-201ENST00000607598 1377 ntBASIC20.03■□□□□ 0.8
VRK1Q99986 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
VRK1Q99986 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.03■□□□□ 0.8
VRK1Q99986 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VRK1Q99986 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
VRK1Q99986 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.02■□□□□ 0.8
VRK1Q99986 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VRK1Q99986 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.02■□□□□ 0.8
VRK1Q99986 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.02■□□□□ 0.8
VRK1Q99986 UNC93B8-201ENST00000511903 705 ntBASIC20.02■□□□□ 0.8
VRK1Q99986 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.02■□□□□ 0.8
VRK1Q99986 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.02■□□□□ 0.8
VRK1Q99986 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms