Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SSX3Q99909 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.08■□□□□ 0.65
SSX3Q99909 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SSX3Q99909 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.08■□□□□ 0.64
SSX3Q99909 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.08■□□□□ 0.64
SSX3Q99909 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SSX3Q99909 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SSX3Q99909 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.08■□□□□ 0.64
SSX3Q99909 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SSX3Q99909 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SSX3Q99909 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SSX3Q99909 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SSX3Q99909 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SSX3Q99909 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SSX3Q99909 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SSX3Q99909 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSX3Q99909 KRT18P24-201ENST00000344739 1156 ntBASIC19.07■□□□□ 0.64
SSX3Q99909 THA1P-201ENST00000590384 1145 ntBASIC19.07■□□□□ 0.64
SSX3Q99909 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SSX3Q99909 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSX3Q99909 AC079834.2-201ENST00000609776 1949 ntBASIC19.07■□□□□ 0.64
SSX3Q99909 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.07■□□□□ 0.64
SSX3Q99909 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
SSX3Q99909 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SSX3Q99909 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSX3Q99909 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SSX3Q99909 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.06■□□□□ 0.64
SSX3Q99909 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSX3Q99909 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SSX3Q99909 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSX3Q99909 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSX3Q99909 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SSX3Q99909 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SSX3Q99909 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.06■□□□□ 0.64
SSX3Q99909 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SSX3Q99909 AC010501.1-201ENST00000606270 1962 ntBASIC19.06■□□□□ 0.64
SSX3Q99909 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSX3Q99909 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSX3Q99909 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SSX3Q99909 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSX3Q99909 AC096887.2-201ENST00000623443 1957 ntBASIC19.05■□□□□ 0.64
SSX3Q99909 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSX3Q99909 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
SSX3Q99909 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSX3Q99909 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.05■□□□□ 0.64
SSX3Q99909 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSX3Q99909 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSX3Q99909 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SSX3Q99909 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
SSX3Q99909 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSX3Q99909 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSX3Q99909 PKD1P6-201ENST00000343738 4769 ntBASIC19.04■□□□□ 0.64
SSX3Q99909 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.04■□□□□ 0.64
SSX3Q99909 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSX3Q99909 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SSX3Q99909 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.04■□□□□ 0.64
SSX3Q99909 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSX3Q99909 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSX3Q99909 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.04■□□□□ 0.64
SSX3Q99909 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSX3Q99909 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SSX3Q99909 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SSX3Q99909 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SSX3Q99909 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
SSX3Q99909 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSX3Q99909 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSX3Q99909 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSX3Q99909 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSX3Q99909 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SSX3Q99909 AC120024.1-201ENST00000562672 995 ntBASIC19.03■□□□□ 0.64
SSX3Q99909 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.03■□□□□ 0.64
SSX3Q99909 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SSX3Q99909 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSX3Q99909 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.03■□□□□ 0.64
SSX3Q99909 AC097639.1-201ENST00000565519 1891 ntBASIC19.03■□□□□ 0.64
SSX3Q99909 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SSX3Q99909 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.02■□□□□ 0.64
SSX3Q99909 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SSX3Q99909 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.02■□□□□ 0.64
SSX3Q99909 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.02■□□□□ 0.64
SSX3Q99909 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SSX3Q99909 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SSX3Q99909 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SSX3Q99909 AC239859.2-201ENST00000444165 318 ntBASIC19.02■□□□□ 0.64
SSX3Q99909 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.02■□□□□ 0.64
SSX3Q99909 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.02■□□□□ 0.64
SSX3Q99909 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SSX3Q99909 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SSX3Q99909 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.02■□□□□ 0.63
SSX3Q99909 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SSX3Q99909 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
SSX3Q99909 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.01■□□□□ 0.63
SSX3Q99909 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
SSX3Q99909 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSX3Q99909 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSX3Q99909 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSX3Q99909 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSX3Q99909 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.01■□□□□ 0.63
SSX3Q99909 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.01■□□□□ 0.63
SSX3Q99909 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms