Protein–RNA interactions for Protein: Q99878

HIST1H2AJ, Histone H2A type 1-J, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AJQ99878 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
HIST1H2AJQ99878 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
HIST1H2AJQ99878 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
HIST1H2AJQ99878 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
HIST1H2AJQ99878 MIR4281-201ENST00000580852 62 ntBASIC22.49■■□□□ 1.19
HIST1H2AJQ99878 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
HIST1H2AJQ99878 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
HIST1H2AJQ99878 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
HIST1H2AJQ99878 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
HIST1H2AJQ99878 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HIST1H2AJQ99878 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
HIST1H2AJQ99878 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
HIST1H2AJQ99878 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
HIST1H2AJQ99878 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.48■■□□□ 1.19
HIST1H2AJQ99878 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.48■■□□□ 1.19
HIST1H2AJQ99878 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.48■■□□□ 1.19
HIST1H2AJQ99878 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
HIST1H2AJQ99878 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.48■■□□□ 1.19
HIST1H2AJQ99878 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
HIST1H2AJQ99878 AC103724.3-201ENST00000564481 992 ntBASIC22.47■■□□□ 1.19
HIST1H2AJQ99878 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
HIST1H2AJQ99878 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
HIST1H2AJQ99878 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
HIST1H2AJQ99878 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
HIST1H2AJQ99878 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.47■■□□□ 1.19
HIST1H2AJQ99878 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.47■■□□□ 1.19
HIST1H2AJQ99878 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
HIST1H2AJQ99878 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
HIST1H2AJQ99878 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
HIST1H2AJQ99878 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
HIST1H2AJQ99878 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.46■■□□□ 1.19
HIST1H2AJQ99878 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC22.46■■□□□ 1.19
HIST1H2AJQ99878 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.46■■□□□ 1.19
HIST1H2AJQ99878 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC22.46■■□□□ 1.19
HIST1H2AJQ99878 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC22.46■■□□□ 1.19
HIST1H2AJQ99878 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC22.46■■□□□ 1.19
HIST1H2AJQ99878 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.46■■□□□ 1.19
HIST1H2AJQ99878 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
HIST1H2AJQ99878 ABCB10P4-201ENST00000566803 2184 ntBASIC22.45■■□□□ 1.18
HIST1H2AJQ99878 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.45■■□□□ 1.18
HIST1H2AJQ99878 AL031848.2-201ENST00000607670 837 ntBASIC22.45■■□□□ 1.18
HIST1H2AJQ99878 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HIST1H2AJQ99878 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
HIST1H2AJQ99878 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
HIST1H2AJQ99878 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HIST1H2AJQ99878 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
HIST1H2AJQ99878 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
HIST1H2AJQ99878 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
HIST1H2AJQ99878 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
HIST1H2AJQ99878 TK2-216ENST00000564917 1156 ntTSL 3 BASIC22.44■■□□□ 1.18
HIST1H2AJQ99878 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
HIST1H2AJQ99878 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HIST1H2AJQ99878 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HIST1H2AJQ99878 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
HIST1H2AJQ99878 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.43■■□□□ 1.18
HIST1H2AJQ99878 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
HIST1H2AJQ99878 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HIST1H2AJQ99878 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
HIST1H2AJQ99878 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HIST1H2AJQ99878 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
HIST1H2AJQ99878 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
HIST1H2AJQ99878 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
HIST1H2AJQ99878 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
HIST1H2AJQ99878 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
HIST1H2AJQ99878 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC22.42■■□□□ 1.18
HIST1H2AJQ99878 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
HIST1H2AJQ99878 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.42■■□□□ 1.18
HIST1H2AJQ99878 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
HIST1H2AJQ99878 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
HIST1H2AJQ99878 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
HIST1H2AJQ99878 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.41■■□□□ 1.18
HIST1H2AJQ99878 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
HIST1H2AJQ99878 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.41■■□□□ 1.18
HIST1H2AJQ99878 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
HIST1H2AJQ99878 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
HIST1H2AJQ99878 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
HIST1H2AJQ99878 AF131216.4-201ENST00000638924 1588 ntBASIC22.41■■□□□ 1.18
HIST1H2AJQ99878 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
HIST1H2AJQ99878 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
HIST1H2AJQ99878 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
HIST1H2AJQ99878 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
HIST1H2AJQ99878 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
HIST1H2AJQ99878 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC22.4■■□□□ 1.18
HIST1H2AJQ99878 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.4■■□□□ 1.18
HIST1H2AJQ99878 AC131274.2-201ENST00000580697 1507 ntBASIC22.4■■□□□ 1.18
HIST1H2AJQ99878 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
HIST1H2AJQ99878 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
HIST1H2AJQ99878 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
HIST1H2AJQ99878 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
HIST1H2AJQ99878 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.39■■□□□ 1.17
HIST1H2AJQ99878 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
HIST1H2AJQ99878 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
HIST1H2AJQ99878 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.39■■□□□ 1.17
HIST1H2AJQ99878 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
HIST1H2AJQ99878 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC22.38■■□□□ 1.17
HIST1H2AJQ99878 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
HIST1H2AJQ99878 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
HIST1H2AJQ99878 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
HIST1H2AJQ99878 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
HIST1H2AJQ99878 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms