Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TM9SF2Q99805 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
TM9SF2Q99805 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
TM9SF2Q99805 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
TM9SF2Q99805 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.16■□□□□ 0.98
TM9SF2Q99805 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TM9SF2Q99805 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TM9SF2Q99805 GUSBP5-201ENST00000418136 578 ntBASIC21.16■□□□□ 0.98
TM9SF2Q99805 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.16■□□□□ 0.98
TM9SF2Q99805 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.16■□□□□ 0.98
TM9SF2Q99805 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
TM9SF2Q99805 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.16■□□□□ 0.98
TM9SF2Q99805 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TM9SF2Q99805 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TM9SF2Q99805 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TM9SF2Q99805 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.15■□□□□ 0.98
TM9SF2Q99805 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TM9SF2Q99805 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TM9SF2Q99805 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
TM9SF2Q99805 BX664725.1-201ENST00000438252 379 ntBASIC21.15■□□□□ 0.98
TM9SF2Q99805 AC239859.2-201ENST00000444165 318 ntBASIC21.15■□□□□ 0.98
TM9SF2Q99805 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.15■□□□□ 0.98
TM9SF2Q99805 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TM9SF2Q99805 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.98
TM9SF2Q99805 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
TM9SF2Q99805 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TM9SF2Q99805 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.14■□□□□ 0.97
TM9SF2Q99805 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TM9SF2Q99805 KRT125P-201ENST00000546827 989 ntBASIC21.14■□□□□ 0.97
TM9SF2Q99805 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.14■□□□□ 0.97
TM9SF2Q99805 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.14■□□□□ 0.97
TM9SF2Q99805 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TM9SF2Q99805 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TM9SF2Q99805 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TM9SF2Q99805 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TM9SF2Q99805 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
TM9SF2Q99805 AC120024.1-201ENST00000562672 995 ntBASIC21.13■□□□□ 0.97
TM9SF2Q99805 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.12■□□□□ 0.97
TM9SF2Q99805 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TM9SF2Q99805 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TM9SF2Q99805 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.12■□□□□ 0.97
TM9SF2Q99805 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TM9SF2Q99805 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.12■□□□□ 0.97
TM9SF2Q99805 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TM9SF2Q99805 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TM9SF2Q99805 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
TM9SF2Q99805 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.12■□□□□ 0.97
TM9SF2Q99805 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TM9SF2Q99805 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.12■□□□□ 0.97
TM9SF2Q99805 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
TM9SF2Q99805 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.11■□□□□ 0.97
TM9SF2Q99805 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TM9SF2Q99805 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TM9SF2Q99805 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.1■□□□□ 0.97
TM9SF2Q99805 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TM9SF2Q99805 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TM9SF2Q99805 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TM9SF2Q99805 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
TM9SF2Q99805 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TM9SF2Q99805 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.1■□□□□ 0.97
TM9SF2Q99805 LINC00543-201ENST00000567234 1845 ntBASIC21.1■□□□□ 0.97
TM9SF2Q99805 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.1■□□□□ 0.97
TM9SF2Q99805 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TM9SF2Q99805 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TM9SF2Q99805 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
TM9SF2Q99805 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TM9SF2Q99805 AC011551.1-201ENST00000614101 683 ntBASIC21.09■□□□□ 0.97
TM9SF2Q99805 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
TM9SF2Q99805 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
TM9SF2Q99805 SLC6A10P-202ENST00000431994 2058 ntBASIC21.09■□□□□ 0.97
TM9SF2Q99805 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TM9SF2Q99805 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TM9SF2Q99805 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
TM9SF2Q99805 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TM9SF2Q99805 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TM9SF2Q99805 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
TM9SF2Q99805 AC137630.3-201ENST00000607245 391 ntBASIC21.08■□□□□ 0.97
TM9SF2Q99805 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.08■□□□□ 0.97
TM9SF2Q99805 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.08■□□□□ 0.96
TM9SF2Q99805 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TM9SF2Q99805 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TM9SF2Q99805 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TM9SF2Q99805 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TM9SF2Q99805 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TM9SF2Q99805 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TM9SF2Q99805 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
TM9SF2Q99805 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
TM9SF2Q99805 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.07■□□□□ 0.96
TM9SF2Q99805 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
TM9SF2Q99805 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TM9SF2Q99805 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.07■□□□□ 0.96
TM9SF2Q99805 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TM9SF2Q99805 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
TM9SF2Q99805 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TM9SF2Q99805 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.06■□□□□ 0.96
TM9SF2Q99805 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TM9SF2Q99805 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TM9SF2Q99805 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
TM9SF2Q99805 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TM9SF2Q99805 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms