Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
NPAS1Q99742 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.94■□□□□ 0.94
NPAS1Q99742 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NPAS1Q99742 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NPAS1Q99742 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NPAS1Q99742 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NPAS1Q99742 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NPAS1Q99742 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
NPAS1Q99742 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.93■□□□□ 0.94
NPAS1Q99742 BX664725.1-201ENST00000438252 379 ntBASIC20.93■□□□□ 0.94
NPAS1Q99742 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.93■□□□□ 0.94
NPAS1Q99742 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.93■□□□□ 0.94
NPAS1Q99742 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NPAS1Q99742 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NPAS1Q99742 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NPAS1Q99742 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NPAS1Q99742 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
NPAS1Q99742 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NPAS1Q99742 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.92■□□□□ 0.94
NPAS1Q99742 AC093323.1-202ENST00000635031 2045 ntBASIC20.92■□□□□ 0.94
NPAS1Q99742 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
NPAS1Q99742 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.92■□□□□ 0.94
NPAS1Q99742 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.92■□□□□ 0.94
NPAS1Q99742 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NPAS1Q99742 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.92■□□□□ 0.94
NPAS1Q99742 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NPAS1Q99742 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.92■□□□□ 0.94
NPAS1Q99742 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPAS1Q99742 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPAS1Q99742 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPAS1Q99742 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.91■□□□□ 0.94
NPAS1Q99742 Z92544.1-202ENST00000571933 1220 ntBASIC20.91■□□□□ 0.94
NPAS1Q99742 AC004812.2-201ENST00000611079 2094 ntBASIC20.9■□□□□ 0.94
NPAS1Q99742 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NPAS1Q99742 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPAS1Q99742 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
NPAS1Q99742 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPAS1Q99742 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPAS1Q99742 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.9■□□□□ 0.94
NPAS1Q99742 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.9■□□□□ 0.94
NPAS1Q99742 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.9■□□□□ 0.94
NPAS1Q99742 MIR4787-201ENST00000607364 84 ntBASIC20.9■□□□□ 0.94
NPAS1Q99742 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.9■□□□□ 0.94
NPAS1Q99742 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPAS1Q99742 LINC00543-201ENST00000567234 1845 ntBASIC20.9■□□□□ 0.94
NPAS1Q99742 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPAS1Q99742 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NPAS1Q99742 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NPAS1Q99742 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NPAS1Q99742 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.89■□□□□ 0.94
NPAS1Q99742 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.89■□□□□ 0.93
NPAS1Q99742 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.89■□□□□ 0.93
NPAS1Q99742 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NPAS1Q99742 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NPAS1Q99742 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
NPAS1Q99742 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPAS1Q99742 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.88■□□□□ 0.93
NPAS1Q99742 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.88■□□□□ 0.93
NPAS1Q99742 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.88■□□□□ 0.93
NPAS1Q99742 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.88■□□□□ 0.93
NPAS1Q99742 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.88■□□□□ 0.93
NPAS1Q99742 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPAS1Q99742 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NPAS1Q99742 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPAS1Q99742 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.87■□□□□ 0.93
NPAS1Q99742 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
NPAS1Q99742 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPAS1Q99742 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPAS1Q99742 KRT125P-201ENST00000546827 989 ntBASIC20.87■□□□□ 0.93
NPAS1Q99742 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
NPAS1Q99742 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPAS1Q99742 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPAS1Q99742 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.87■□□□□ 0.93
NPAS1Q99742 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPAS1Q99742 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPAS1Q99742 GUSBP5-201ENST00000418136 578 ntBASIC20.86■□□□□ 0.93
NPAS1Q99742 SNX5-217ENST00000606557 1087 ntBASIC20.86■□□□□ 0.93
NPAS1Q99742 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.86■□□□□ 0.93
NPAS1Q99742 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPAS1Q99742 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPAS1Q99742 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.86■□□□□ 0.93
NPAS1Q99742 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPAS1Q99742 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NPAS1Q99742 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NPAS1Q99742 AC092028.1-203ENST00000608262 953 ntBASIC20.85■□□□□ 0.93
NPAS1Q99742 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.85■□□□□ 0.93
NPAS1Q99742 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPAS1Q99742 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NPAS1Q99742 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPAS1Q99742 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.84■□□□□ 0.93
NPAS1Q99742 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.84■□□□□ 0.93
NPAS1Q99742 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.84■□□□□ 0.93
NPAS1Q99742 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPAS1Q99742 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.84■□□□□ 0.93
NPAS1Q99742 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.84■□□□□ 0.93
NPAS1Q99742 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.84■□□□□ 0.93
NPAS1Q99742 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPAS1Q99742 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.84■□□□□ 0.93
NPAS1Q99742 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.84■□□□□ 0.93
NPAS1Q99742 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms