Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCL13Q99616 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.24■□□□□ 0.67
CCL13Q99616 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CCL13Q99616 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCL13Q99616 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.23■□□□□ 0.67
CCL13Q99616 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCL13Q99616 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCL13Q99616 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCL13Q99616 LINC00543-201ENST00000567234 1845 ntBASIC19.23■□□□□ 0.67
CCL13Q99616 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.23■□□□□ 0.67
CCL13Q99616 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCL13Q99616 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCL13Q99616 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCL13Q99616 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.22■□□□□ 0.67
CCL13Q99616 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCL13Q99616 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.22■□□□□ 0.67
CCL13Q99616 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCL13Q99616 AC092028.1-203ENST00000608262 953 ntBASIC19.22■□□□□ 0.67
CCL13Q99616 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCL13Q99616 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.22■□□□□ 0.67
CCL13Q99616 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CCL13Q99616 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.22■□□□□ 0.67
CCL13Q99616 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.22■□□□□ 0.67
CCL13Q99616 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
CCL13Q99616 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCL13Q99616 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCL13Q99616 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCL13Q99616 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCL13Q99616 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCL13Q99616 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCL13Q99616 TSPY9P-201ENST00000440215 945 ntBASIC19.21■□□□□ 0.67
CCL13Q99616 TSPY11P-201ENST00000442607 1045 ntBASIC19.21■□□□□ 0.67
CCL13Q99616 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CCL13Q99616 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCL13Q99616 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCL13Q99616 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCL13Q99616 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.2■□□□□ 0.66
CCL13Q99616 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCL13Q99616 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.2■□□□□ 0.66
CCL13Q99616 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCL13Q99616 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCL13Q99616 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCL13Q99616 AC141586.4-201ENST00000624558 1573 ntBASIC19.2■□□□□ 0.66
CCL13Q99616 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CCL13Q99616 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CCL13Q99616 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CCL13Q99616 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.2■□□□□ 0.66
CCL13Q99616 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCL13Q99616 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.2■□□□□ 0.66
CCL13Q99616 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCL13Q99616 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CCL13Q99616 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.2■□□□□ 0.66
CCL13Q99616 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.2■□□□□ 0.66
CCL13Q99616 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.2■□□□□ 0.66
CCL13Q99616 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCL13Q99616 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.2■□□□□ 0.66
CCL13Q99616 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCL13Q99616 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCL13Q99616 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCL13Q99616 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCL13Q99616 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCL13Q99616 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCL13Q99616 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.19■□□□□ 0.66
CCL13Q99616 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCL13Q99616 AC004448.1-201ENST00000458332 883 ntBASIC19.19■□□□□ 0.66
CCL13Q99616 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.19■□□□□ 0.66
CCL13Q99616 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCL13Q99616 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.19■□□□□ 0.66
CCL13Q99616 SNX5-217ENST00000606557 1087 ntBASIC19.19■□□□□ 0.66
CCL13Q99616 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCL13Q99616 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCL13Q99616 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCL13Q99616 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCL13Q99616 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCL13Q99616 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.19■□□□□ 0.66
CCL13Q99616 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCL13Q99616 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCL13Q99616 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.18■□□□□ 0.66
CCL13Q99616 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCL13Q99616 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.18■□□□□ 0.66
CCL13Q99616 GUSBP5-201ENST00000418136 578 ntBASIC19.18■□□□□ 0.66
CCL13Q99616 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.18■□□□□ 0.66
CCL13Q99616 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.18■□□□□ 0.66
CCL13Q99616 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCL13Q99616 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCL13Q99616 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CCL13Q99616 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CCL13Q99616 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CCL13Q99616 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CCL13Q99616 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
CCL13Q99616 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCL13Q99616 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.17■□□□□ 0.66
CCL13Q99616 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.17■□□□□ 0.66
CCL13Q99616 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCL13Q99616 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCL13Q99616 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCL13Q99616 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCL13Q99616 AL161729.1-201ENST00000604104 1402 ntBASIC19.17■□□□□ 0.66
CCL13Q99616 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCL13Q99616 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms