Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
LYSMD1Q96S90 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LYSMD1Q96S90 UNC93B8-201ENST00000511903 705 ntBASIC23.02■■□□□ 1.28
LYSMD1Q96S90 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.02■■□□□ 1.28
LYSMD1Q96S90 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.02■■□□□ 1.28
LYSMD1Q96S90 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.02■■□□□ 1.28
LYSMD1Q96S90 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LYSMD1Q96S90 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.02■■□□□ 1.28
LYSMD1Q96S90 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
LYSMD1Q96S90 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LYSMD1Q96S90 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
LYSMD1Q96S90 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.01■■□□□ 1.27
LYSMD1Q96S90 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.01■■□□□ 1.27
LYSMD1Q96S90 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.01■■□□□ 1.27
LYSMD1Q96S90 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LYSMD1Q96S90 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
LYSMD1Q96S90 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LYSMD1Q96S90 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
LYSMD1Q96S90 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
LYSMD1Q96S90 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
LYSMD1Q96S90 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LYSMD1Q96S90 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23■■□□□ 1.27
LYSMD1Q96S90 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23■■□□□ 1.27
LYSMD1Q96S90 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
LYSMD1Q96S90 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.99■■□□□ 1.27
LYSMD1Q96S90 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
LYSMD1Q96S90 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
LYSMD1Q96S90 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC22.99■■□□□ 1.27
LYSMD1Q96S90 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC22.99■■□□□ 1.27
LYSMD1Q96S90 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.99■■□□□ 1.27
LYSMD1Q96S90 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
LYSMD1Q96S90 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.98■■□□□ 1.27
LYSMD1Q96S90 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.98■■□□□ 1.27
LYSMD1Q96S90 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC22.98■■□□□ 1.27
LYSMD1Q96S90 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
LYSMD1Q96S90 MTDHP2-201ENST00000601468 714 ntBASIC22.98■■□□□ 1.27
LYSMD1Q96S90 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
LYSMD1Q96S90 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
LYSMD1Q96S90 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
LYSMD1Q96S90 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
LYSMD1Q96S90 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
LYSMD1Q96S90 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.97■■□□□ 1.27
LYSMD1Q96S90 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
LYSMD1Q96S90 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
LYSMD1Q96S90 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
LYSMD1Q96S90 TSPY9P-201ENST00000440215 945 ntBASIC22.97■■□□□ 1.27
LYSMD1Q96S90 TSPY11P-201ENST00000442607 1045 ntBASIC22.97■■□□□ 1.27
LYSMD1Q96S90 AC010997.5-201ENST00000609182 354 ntBASIC22.97■■□□□ 1.27
LYSMD1Q96S90 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
LYSMD1Q96S90 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.96■■□□□ 1.27
LYSMD1Q96S90 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.96■■□□□ 1.27
LYSMD1Q96S90 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
LYSMD1Q96S90 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.95■■□□□ 1.26
LYSMD1Q96S90 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC22.95■■□□□ 1.26
LYSMD1Q96S90 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
LYSMD1Q96S90 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
LYSMD1Q96S90 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
LYSMD1Q96S90 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
LYSMD1Q96S90 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
LYSMD1Q96S90 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
LYSMD1Q96S90 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
LYSMD1Q96S90 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.94■■□□□ 1.26
LYSMD1Q96S90 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
LYSMD1Q96S90 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
LYSMD1Q96S90 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.94■■□□□ 1.26
LYSMD1Q96S90 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
LYSMD1Q96S90 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
LYSMD1Q96S90 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
LYSMD1Q96S90 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
LYSMD1Q96S90 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
LYSMD1Q96S90 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
LYSMD1Q96S90 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
LYSMD1Q96S90 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
LYSMD1Q96S90 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.93■■□□□ 1.26
LYSMD1Q96S90 KRT16P3-201ENST00000439127 1283 ntBASIC22.93■■□□□ 1.26
LYSMD1Q96S90 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
LYSMD1Q96S90 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
LYSMD1Q96S90 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
LYSMD1Q96S90 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
LYSMD1Q96S90 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
LYSMD1Q96S90 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
LYSMD1Q96S90 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.92■■□□□ 1.26
LYSMD1Q96S90 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
LYSMD1Q96S90 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
LYSMD1Q96S90 AL356441.2-201ENST00000443009 864 ntBASIC22.92■■□□□ 1.26
LYSMD1Q96S90 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC22.92■■□□□ 1.26
LYSMD1Q96S90 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
LYSMD1Q96S90 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.91■■□□□ 1.26
LYSMD1Q96S90 ALDH1A3-203ENST00000557963 1670 ntBASIC22.91■■□□□ 1.26
LYSMD1Q96S90 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
LYSMD1Q96S90 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
LYSMD1Q96S90 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.91■■□□□ 1.26
LYSMD1Q96S90 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
LYSMD1Q96S90 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC22.91■■□□□ 1.26
LYSMD1Q96S90 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.91■■□□□ 1.26
LYSMD1Q96S90 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.26
LYSMD1Q96S90 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
LYSMD1Q96S90 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
LYSMD1Q96S90 AC004812.2-201ENST00000611079 2094 ntBASIC22.9■■□□□ 1.26
LYSMD1Q96S90 MIR6724-1-201ENST00000616420 92 ntBASIC22.9■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 602.3 ms