Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
FOXN4Q96NZ1 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FOXN4Q96NZ1 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.52■□□□□ 0.88
FOXN4Q96NZ1 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
FOXN4Q96NZ1 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.52■□□□□ 0.88
FOXN4Q96NZ1 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FOXN4Q96NZ1 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.52■□□□□ 0.88
FOXN4Q96NZ1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FOXN4Q96NZ1 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
FOXN4Q96NZ1 AL451085.2-201ENST00000605085 799 ntBASIC20.52■□□□□ 0.88
FOXN4Q96NZ1 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
FOXN4Q96NZ1 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.52■□□□□ 0.88
FOXN4Q96NZ1 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
FOXN4Q96NZ1 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
FOXN4Q96NZ1 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
FOXN4Q96NZ1 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
FOXN4Q96NZ1 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
FOXN4Q96NZ1 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
FOXN4Q96NZ1 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
FOXN4Q96NZ1 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
FOXN4Q96NZ1 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
FOXN4Q96NZ1 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
FOXN4Q96NZ1 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.51■□□□□ 0.87
FOXN4Q96NZ1 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.51■□□□□ 0.87
FOXN4Q96NZ1 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
FOXN4Q96NZ1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.51■□□□□ 0.87
FOXN4Q96NZ1 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
FOXN4Q96NZ1 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
FOXN4Q96NZ1 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
FOXN4Q96NZ1 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FOXN4Q96NZ1 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
FOXN4Q96NZ1 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
FOXN4Q96NZ1 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.5■□□□□ 0.87
FOXN4Q96NZ1 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
FOXN4Q96NZ1 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
FOXN4Q96NZ1 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
FOXN4Q96NZ1 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
FOXN4Q96NZ1 YBX1P4-201ENST00000392794 808 ntBASIC20.5■□□□□ 0.87
FOXN4Q96NZ1 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
FOXN4Q96NZ1 PVT1_1.1-201ENST00000615125 194 ntBASIC20.5■□□□□ 0.87
FOXN4Q96NZ1 AL035685.1-201ENST00000636663 812 ntBASIC20.5■□□□□ 0.87
FOXN4Q96NZ1 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
FOXN4Q96NZ1 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
FOXN4Q96NZ1 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FOXN4Q96NZ1 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FOXN4Q96NZ1 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
FOXN4Q96NZ1 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.49■□□□□ 0.87
FOXN4Q96NZ1 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
FOXN4Q96NZ1 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
FOXN4Q96NZ1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
FOXN4Q96NZ1 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FOXN4Q96NZ1 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.48■□□□□ 0.87
FOXN4Q96NZ1 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
FOXN4Q96NZ1 AC103834.1-201ENST00000520383 144 ntBASIC20.48■□□□□ 0.87
FOXN4Q96NZ1 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FOXN4Q96NZ1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FOXN4Q96NZ1 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
FOXN4Q96NZ1 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.48■□□□□ 0.87
FOXN4Q96NZ1 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
FOXN4Q96NZ1 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.48■□□□□ 0.87
FOXN4Q96NZ1 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
FOXN4Q96NZ1 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
FOXN4Q96NZ1 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
FOXN4Q96NZ1 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
FOXN4Q96NZ1 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
FOXN4Q96NZ1 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
FOXN4Q96NZ1 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.47■□□□□ 0.87
FOXN4Q96NZ1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
FOXN4Q96NZ1 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
FOXN4Q96NZ1 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.47■□□□□ 0.87
FOXN4Q96NZ1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
FOXN4Q96NZ1 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
FOXN4Q96NZ1 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
FOXN4Q96NZ1 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
FOXN4Q96NZ1 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
FOXN4Q96NZ1 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXN4Q96NZ1 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.46■□□□□ 0.87
FOXN4Q96NZ1 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXN4Q96NZ1 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXN4Q96NZ1 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXN4Q96NZ1 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.46■□□□□ 0.87
FOXN4Q96NZ1 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.46■□□□□ 0.87
FOXN4Q96NZ1 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.46■□□□□ 0.87
FOXN4Q96NZ1 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
FOXN4Q96NZ1 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
FOXN4Q96NZ1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
FOXN4Q96NZ1 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.46■□□□□ 0.87
FOXN4Q96NZ1 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXN4Q96NZ1 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
FOXN4Q96NZ1 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
FOXN4Q96NZ1 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
FOXN4Q96NZ1 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
FOXN4Q96NZ1 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.44■□□□□ 0.86
FOXN4Q96NZ1 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXN4Q96NZ1 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXN4Q96NZ1 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXN4Q96NZ1 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXN4Q96NZ1 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXN4Q96NZ1 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
FOXN4Q96NZ1 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms