Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.88■■□□□ 1.09
LRRC58Q96CX6 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LRRC58Q96CX6 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LRRC58Q96CX6 CLDN5-201ENST00000403084 2357 ntBASIC21.87■■□□□ 1.09
LRRC58Q96CX6 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRRC58Q96CX6 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRRC58Q96CX6 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.87■■□□□ 1.09
LRRC58Q96CX6 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRRC58Q96CX6 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LRRC58Q96CX6 AC026202.3-201ENST00000600805 1127 ntBASIC21.86■■□□□ 1.09
LRRC58Q96CX6 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.86■■□□□ 1.09
LRRC58Q96CX6 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LRRC58Q96CX6 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.86■■□□□ 1.09
LRRC58Q96CX6 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LRRC58Q96CX6 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LRRC58Q96CX6 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LRRC58Q96CX6 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.85■■□□□ 1.09
LRRC58Q96CX6 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LRRC58Q96CX6 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
LRRC58Q96CX6 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.84■■□□□ 1.09
LRRC58Q96CX6 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRRC58Q96CX6 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRRC58Q96CX6 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
LRRC58Q96CX6 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.84■■□□□ 1.09
LRRC58Q96CX6 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRRC58Q96CX6 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRRC58Q96CX6 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
LRRC58Q96CX6 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LRRC58Q96CX6 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
LRRC58Q96CX6 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LRRC58Q96CX6 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LRRC58Q96CX6 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LRRC58Q96CX6 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LRRC58Q96CX6 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
LRRC58Q96CX6 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
LRRC58Q96CX6 AC092068.2-201ENST00000590491 1708 ntBASIC21.83■■□□□ 1.08
LRRC58Q96CX6 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.83■■□□□ 1.08
LRRC58Q96CX6 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
LRRC58Q96CX6 DUSP8P3-201ENST00000399571 1760 ntBASIC21.82■■□□□ 1.08
LRRC58Q96CX6 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.82■■□□□ 1.08
LRRC58Q96CX6 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.82■■□□□ 1.08
LRRC58Q96CX6 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
LRRC58Q96CX6 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
LRRC58Q96CX6 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.82■■□□□ 1.08
LRRC58Q96CX6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
LRRC58Q96CX6 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
LRRC58Q96CX6 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LRRC58Q96CX6 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
LRRC58Q96CX6 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRRC58Q96CX6 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
LRRC58Q96CX6 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRRC58Q96CX6 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LRRC58Q96CX6 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.81■■□□□ 1.08
LRRC58Q96CX6 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRRC58Q96CX6 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRRC58Q96CX6 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRRC58Q96CX6 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LRRC58Q96CX6 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRRC58Q96CX6 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRRC58Q96CX6 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRRC58Q96CX6 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRRC58Q96CX6 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRRC58Q96CX6 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.81■■□□□ 1.08
LRRC58Q96CX6 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
LRRC58Q96CX6 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRRC58Q96CX6 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRRC58Q96CX6 EP400NL-214ENST00000641289 2402 ntBASIC21.8■■□□□ 1.08
LRRC58Q96CX6 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
LRRC58Q96CX6 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.8■■□□□ 1.08
LRRC58Q96CX6 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRRC58Q96CX6 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRRC58Q96CX6 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.79■■□□□ 1.08
LRRC58Q96CX6 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
LRRC58Q96CX6 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.79■■□□□ 1.08
LRRC58Q96CX6 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
LRRC58Q96CX6 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRRC58Q96CX6 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRRC58Q96CX6 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
LRRC58Q96CX6 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRRC58Q96CX6 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRRC58Q96CX6 MIR639-201ENST00000384974 98 ntBASIC21.78■■□□□ 1.08
LRRC58Q96CX6 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.78■■□□□ 1.08
LRRC58Q96CX6 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.78■■□□□ 1.08
LRRC58Q96CX6 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRRC58Q96CX6 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRRC58Q96CX6 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRRC58Q96CX6 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
LRRC58Q96CX6 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LRRC58Q96CX6 C1orf229-201ENST00000623686 2258 ntBASIC21.77■■□□□ 1.08
LRRC58Q96CX6 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LRRC58Q96CX6 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
LRRC58Q96CX6 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
LRRC58Q96CX6 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.77■■□□□ 1.08
LRRC58Q96CX6 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LRRC58Q96CX6 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LRRC58Q96CX6 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LRRC58Q96CX6 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.77■■□□□ 1.08
LRRC58Q96CX6 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
LRRC58Q96CX6 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LRRC58Q96CX6 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms