Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.07■□□□□ 0.48
NPIPB3Q92617 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC18.07■□□□□ 0.48
NPIPB3Q92617 AL592293.1-201ENST00000502889 1188 ntBASIC18.07■□□□□ 0.48
NPIPB3Q92617 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.07■□□□□ 0.48
NPIPB3Q92617 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NPIPB3Q92617 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NPIPB3Q92617 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NPIPB3Q92617 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NPIPB3Q92617 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NPIPB3Q92617 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPIPB3Q92617 C9orf163-202ENST00000624034 2573 ntBASIC18.06■□□□□ 0.48
NPIPB3Q92617 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.06■□□□□ 0.48
NPIPB3Q92617 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
NPIPB3Q92617 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
NPIPB3Q92617 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPIPB3Q92617 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.06■□□□□ 0.48
NPIPB3Q92617 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPIPB3Q92617 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPIPB3Q92617 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
NPIPB3Q92617 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.05■□□□□ 0.48
NPIPB3Q92617 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NPIPB3Q92617 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NPIPB3Q92617 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
NPIPB3Q92617 SPCS2P3-201ENST00000500401 656 ntBASIC18.05■□□□□ 0.48
NPIPB3Q92617 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
NPIPB3Q92617 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.05■□□□□ 0.48
NPIPB3Q92617 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPIPB3Q92617 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.05■□□□□ 0.48
NPIPB3Q92617 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.05■□□□□ 0.48
NPIPB3Q92617 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
NPIPB3Q92617 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
NPIPB3Q92617 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NPIPB3Q92617 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NPIPB3Q92617 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
NPIPB3Q92617 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NPIPB3Q92617 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NPIPB3Q92617 AL592295.1-201ENST00000400984 884 ntBASIC18.04■□□□□ 0.48
NPIPB3Q92617 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NPIPB3Q92617 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.04■□□□□ 0.48
NPIPB3Q92617 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.04■□□□□ 0.48
NPIPB3Q92617 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.04■□□□□ 0.48
NPIPB3Q92617 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NPIPB3Q92617 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
NPIPB3Q92617 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NPIPB3Q92617 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
NPIPB3Q92617 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
NPIPB3Q92617 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
NPIPB3Q92617 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NPIPB3Q92617 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NPIPB3Q92617 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.03■□□□□ 0.48
NPIPB3Q92617 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
NPIPB3Q92617 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NPIPB3Q92617 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NPIPB3Q92617 AC087393.1-201ENST00000582896 145 ntBASIC18.03■□□□□ 0.48
NPIPB3Q92617 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NPIPB3Q92617 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
NPIPB3Q92617 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NPIPB3Q92617 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
NPIPB3Q92617 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NPIPB3Q92617 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
NPIPB3Q92617 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.02■□□□□ 0.48
NPIPB3Q92617 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NPIPB3Q92617 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
NPIPB3Q92617 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NPIPB3Q92617 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NPIPB3Q92617 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
NPIPB3Q92617 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NPIPB3Q92617 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NPIPB3Q92617 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NPIPB3Q92617 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NPIPB3Q92617 MIR6765-201ENST00000614092 87 ntBASIC18.02■□□□□ 0.48
NPIPB3Q92617 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
NPIPB3Q92617 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC18.02■□□□□ 0.47
NPIPB3Q92617 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
NPIPB3Q92617 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NPIPB3Q92617 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
NPIPB3Q92617 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NPIPB3Q92617 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
NPIPB3Q92617 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NPIPB3Q92617 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NPIPB3Q92617 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NPIPB3Q92617 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NPIPB3Q92617 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NPIPB3Q92617 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
NPIPB3Q92617 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NPIPB3Q92617 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NPIPB3Q92617 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.01■□□□□ 0.47
NPIPB3Q92617 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC18.01■□□□□ 0.47
NPIPB3Q92617 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.01■□□□□ 0.47
NPIPB3Q92617 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC18.01■□□□□ 0.47
NPIPB3Q92617 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
NPIPB3Q92617 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NPIPB3Q92617 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.01■□□□□ 0.47
NPIPB3Q92617 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NPIPB3Q92617 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NPIPB3Q92617 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
NPIPB3Q92617 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18■□□□□ 0.47
NPIPB3Q92617 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
NPIPB3Q92617 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
NPIPB3Q92617 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms